RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 NRARPQ7Z6K4 114 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 CXorf67Q86X51 503 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-234ENST00000642041 SAXO1Q8IYX7 474 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 OR5AS1Q8N127 324 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 SLC30A7Q8NEW0 376 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 OR51A2Q8NGJ7 313 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 TMEM158Q8WZ71 300 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 METTL9Q9H1A3 318 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 CDH20Q9HBT6 801 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 MTFP1Q9UDX5 166 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 ZNF629Q9UEG4 869 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-234ENST00000642041 NUBP2Q9Y5Y2 271 aa14.81□□□□□ -0.04
PHGDH-234ENST00000642041 ARHGAP21Q5T5U3 1957 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 MSTNO14793 375 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 PLA2G10O15496 165 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 GMDSO60547 372 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 LPLP06858 475 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 TBPP20226 339 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 RCVRNP35243 200 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 MTCP1P56278 107 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 RAB25P57735 213 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 MZT1Q08AG7 82 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 GLIPR1L1Q6UWM5 242 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 PLXDC2Q6UX71 529 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 NAA40Q86UY6 237 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 LRRC75A-AS1Q8N1F1 130 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 HTRA1Q92743 480 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 Q96MF0 132 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 C11orf54Q9H0W9 315 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-234ENST00000642041 OCEL1Q9H607 264 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.8□□□□□ -0.04
PHGDH-234ENST00000642041 ELOVL5Q9NYP7 299 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 IL36GQ9NZH8 169 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 CGGBP1Q9UFW8 167 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-234ENST00000642041 SPEF1Q9Y4P9 236 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 MED12LQ86YW9 2145 aa14.8□□□□□ -0.04
PHGDH-234ENST00000642041 TRAV18A0A075B6X5 111 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 ANKRD30BLA7E2S9 258 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 CUBNO60494 3623 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 CSTBP04080 98 aaKnown RBP14.79□□□□□ -0.04
PHGDH-234ENST00000642041 CPT2P23786 658 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 SLC6A1P30531 599 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 GDNFP39905 211 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 ZMYND11Q15326 602 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 TIMM23BQ5SRD1 257 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 SFRP5Q5T4F7 317 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 PRSS57Q6UWY2 283 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 ASCL4Q6XD76 172 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 SNX29P2Q8IUI4 249 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 GCNT2Q8N0V5 402 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 OR5A2Q8NGI9 324 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 OR4D6Q8NGJ1 314 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 FGFBP3Q8TAT2 258 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 STARD4Q96DR4 205 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 MARVELD1Q9BSK0 173 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 TMEM59Q9BXS4 323 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 BCL2L14Q9BZR8 327 aa14.79□□□□□ -0.04
PHGDH-234ENST00000642041 LOC100509620A0A075B734 347 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 A0A0B4J203 849 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 ANKRD20A5PA0PJZ0 165 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A10PA6NDY2 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A18PA6NE21 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A16PA6NEW6 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A20PA6NIJ5 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A8PA6NJQ4 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A7PA6NKC0 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 OR5B21A6NL26 309 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A22PA8MWA6 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A12PA8MX19 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A5PA8MXJ8 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A23PA8MXZ1 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 H3BSH0 61 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 WIPF1O43516 503 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 TNFSF13O75888 250 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 CGAP01215 116 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 IGKV3-15P01624 115 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A15PP0C7V4 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A13PP0C7W8 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A14PP0C7W9 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAM90A24PP0C7X0 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 PATE4P0C8F1 98 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 VSIG8P0DPA2 414 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 RAC2P15153 192 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FAHP16930 419 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 PSMB1P20618 241 aaKnown RBP14.78□□□□□ -0.04
PHGDH-234ENST00000642041 CCNOP22674 350 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 TAS2R19P59542 299 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 FBXW12Q6X9E4 464 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 ZNF554Q86TJ5 538 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 SLC7A6Q92536 515 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 MUCL1Q96DR8 90 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 TM2D1Q9BX74 207 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 PLK3Q9H4B4 646 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 AUNIPQ9H7T9 357 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 RHBDD3Q9Y3P4 386 aa14.78□□□□□ -0.04
PHGDH-234ENST00000642041 A0A1B0GVG6 124 aa14.77□□□□□ -0.05
PHGDH-234ENST00000642041 SERPINE3A8MV23 424 aa14.77□□□□□ -0.05
PHGDH-234ENST00000642041 PRAF2O60831 178 aa14.77□□□□□ -0.05
PHGDH-234ENST00000642041 GOSR1O95249 250 aa14.77□□□□□ -0.05
PHGDH-234ENST00000642041 GTF2F2P13984 249 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms