RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	TIAF1	O95411	115 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SFT2D2	O95562	160 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CH25H	O95992	272 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	IL18BP	O95998	194 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	IGHE	P01854	428 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CAT	P04040	527 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PCCB	P05166	539 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CKM	P06732	381 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CYC1	P08574	325 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	MMP7	P09237	267 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CXCL1	P09341	107 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	OR4A8	P0C604	315 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PGA4	P0DJD7	388 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PGA5	P0DJD9	388 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SMIM10L2A	P0DMW4	78 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SMIM10L2B	P0DMW5	78 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CD99	P14209	185 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ZNF16	P17020	682 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ACRV1	P26436	265 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	AOAH	P28039	575 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	NTS	P30990	170 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	FCGR2C	P31995	323 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CEACAM8	P31997	349 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SRP14	P37108	136 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	BUD31	P41223	144 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ACAA2	P42765	397 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	LSS	P48449	732 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CEBPD	P49716	269 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CNN1	P51911	297 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PDX1	P52945	283 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	MANF	P55145	182 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	MTCP1	P56278	107 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SNRPN	P63162	240 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SUMO1	P63165	101 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	HTD2	P86397	168 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ZNF85	Q03923	595 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	MFGE8	Q08431	387 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PIN1	Q13526	163 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ENDOG	Q14249	297 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	GPR18	Q14330	331 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	IL13RA2	Q14627	380 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SLC9A3R2	Q15599	337 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	VAMP3	Q15836	100 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	MPPE1	Q53F39	396 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PLAC9	Q5JTB6	97 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PRAMEF20	Q5VT98	475 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SDHAF4	Q5VUM1	108 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	FAM219B	Q5XKK7	198 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	WSCD1	Q658N2	575 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	RPL7L1	Q6DKI1	246 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	RTL6	Q6ICC9	239 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	FDX2	Q6P4F2	183 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PRSS57	Q6UWY2	283 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	STAC2	Q6ZMT1	411 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ZNF66	Q6ZN08	573 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	C1orf122	Q6ZSJ8	110 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	TMPPE	Q6ZT21	453 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	COX15	Q7KZN9	410 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	C5orf24	Q7Z6I8	188 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	LHFPL4	Q7Z7J7	247 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SPNS2	Q8IVW8	549 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SGPP2	Q8IWX5	399 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	NXPE1	Q8N323	547 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	OR2L13	Q8N349	312 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	D2HGDH	Q8N465	521 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	AMER3	Q8N944	861 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	C17orf47	Q8NEP4	570 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861		Q8NFD4	153 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	OR8S1	Q8NH09	359 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CMTM2	Q8TAZ6	248 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	FNDC9	Q8TBE3	224 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CEP192	Q8TEP8	1941 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	C2orf15	Q8WU43	125 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	NUDT8	Q8WV74	236 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	TMEM40	Q8WWA1	233 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	HAS2	Q92819	552 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	BCL2L2	Q92843	193 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	GLYATL1	Q969I3	302 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	DDIT4L	Q96D03	193 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	TMEM169	Q96HH4	297 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	REEP6	Q96HR9	211 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	JSRP1	Q96MG2	331 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ALKBH3	Q96Q83	286 aa	Predicted RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	HIST1H2AA	Q96QV6	131 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	TBX15	Q96SF7	602 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SMAD5	Q99717	465 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	MACROD1	Q9BQ69	325 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	DOCK9	Q9BZ29	2069 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	PKIB	Q9C010	78 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	SLC25A18	Q9H1K4	315 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	OR52D1	Q9H346	318 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CST9L	Q9H4G1	147 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	CHODL	Q9H9P2	273 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	WFDC1	Q9HC57	220 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	TUBG2	Q9NRH3	451 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	MRPL22	Q9NWU5	206 aa	Known RBP	3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ZNF586	Q9NXT0	402 aa		3.57	□□□□□ -1.84
CHD2-225	ENST00000636861	ZDHHC3	Q9NYG2	299 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms