RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 SEMA7AO75326 666 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 PF4V1P10720 104 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 CALCRP30988 508 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 RPS19P39019 145 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 CALHM3Q86XJ0 350 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 SAP30LQ9HAJ7 183 aa15.95■□□□□ 0.14
CACNA1A-227ENST00000636549 HNRNPA3P51991 378 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 PABPC1L2AQ5JQF8 200 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 NKX6-2Q9C056 277 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 SERGEFQ9UGK8 458 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 PHOX2AO14813 284 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 ACER2Q5QJU3 275 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 OR52N1Q8NH53 320 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 DMRTA2Q96SC8 542 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 MOB1AQ9H8S9 216 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 CCL4P13236 92 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 TCEAL1Q15170 157 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 HIKESHIQ53FT3 197 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 TMEM215Q68D42 235 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 GDPGP1Q6ZNW5 385 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 RHOFQ9HBH0 211 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 GNG7O60262 68 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 TTRP02766 147 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 SLC37A1P57057 533 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 SCGB1D4Q6XE38 83 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 ZNF586Q9NXT0 402 aa15.94■□□□□ 0.14
CACNA1A-227ENST00000636549 NID1P14543 1247 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 ARRB2P32121 409 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 SLC25A30Q5SVS4 291 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 NRTNQ99748 197 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 ARNTLO00327 626 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 DHHO43323 396 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 DHODHQ02127 395 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 ROM1Q03395 351 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 TPBGQ13641 420 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 SPRED3Q2MJR0 410 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 DRAXINQ8NBI3 349 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 TMEM171Q8WVE6 324 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 MRGPRX4Q96LA9 322 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 CD276Q5ZPR3 534 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 TRAT1Q6PIZ9 186 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 RTN4IP1Q8WWV3 396 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 C4orf45Q96LM5 186 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 C7orf72A4D263 438 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 OR3A1P47881 315 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 PWWP2BQ6NUJ5 590 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 Q6ZSR9 355 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 NIT2Q9NQR4 276 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 DIMT1Q9UNQ2 313 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 LRP12Q9Y561 859 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 FUT6P51993 359 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 IL11RAQ14626 422 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 FAM27D1Q5T7N8 215 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 C6orf201Q7Z4U5 140 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 ABI3BPQ7Z7G0 1075 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 OR4C5Q8NGB2 326 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 MS4A10Q96PG2 267 aa15.93■□□□□ 0.14
CACNA1A-227ENST00000636549 TARM1B6A8C7 271 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 TMEM92Q6UXU6 159 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 APOBEC4Q8WW27 367 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 ZNF768Q9H5H4 540 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 UPK1AO00322 258 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 HOXC11O43248 304 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 HMGA1P17096 107 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 APOBEC3DQ96AK3 386 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 WDR89Q96FK6 387 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 SOSTQ9BQB4 213 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 VN1R1Q9GZP7 353 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 NDUFB11Q9NX14 153 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 C19orf53Q9UNZ5 99 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 TBX19O60806 448 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 ACP1P24666 158 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 GSCP56915 257 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 CD81P60033 236 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 DUSP8Q13202 625 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 OR10A7Q8NGE5 316 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 SLC7A10Q9NS82 523 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 TCRBV3S1A0A5B6 114 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 ADRA2AP08913 450 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 RBPMSQ93062 196 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 NAT8BQ9UHF3 227 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 ZNF32P17041 273 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 CHRNA7P36544 502 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 PPICP45877 212 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 GGTA1PQ4G0N0 100 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 CGB2Q6NT52 195 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 EDARADDQ8WWZ3 215 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 TCEAL7Q9BRU2 100 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 YTHDF2Q9Y5A9 579 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 BCL3P20749 454 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 GZMKP49863 264 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 OTUD1Q5VV17 481 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 TUBA4BQ9H853 241 aa15.92■□□□□ 0.14
CACNA1A-227ENST00000636549 A0A1B0GTH9 108 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 GNG4P50150 75 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 KIRREL2Q6UWL6 708 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 EVPLQ92817 2033 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 MOB1BQ7L9L4 216 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 TMEM37Q8WXS4 190 aa15.91■□□□□ 0.14
CACNA1A-227ENST00000636549 CEACAM5P06731 702 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms