RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CDPF1Q6NVV7 123 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF600Q6ZNG1 722 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 OR52N5Q8NH56 324 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 RHOVQ96L33 236 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 GPX7Q96SL4 187 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 PAPOLGQ9BWT3 736 aaKnown RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 PRDM6Q9NQX0 595 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 SLC2A8Q9NY64 477 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 KLHL13Q9P2N7 655 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ASH2LQ9UBL3 628 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 MMACHCQ9Y4U1 282 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 RFNGQ9Y644 331 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 NBASA2RRP1 2371 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 CACNA1HO95180 2353 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 NSG1A0A0A6YYJ2 146 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 STMND1H3BQB6 276 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 CLN5O75503 358 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 LINC00271P0C7V0 271 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 MYF5P13349 255 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 HAAOP46952 286 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 POLR2HP52434 150 aaKnown RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 NKAIN1Q4KMZ8 207 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 CATSPERDQ86XM0 798 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 SLC43A2Q8N370 569 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ARL5BQ96KC2 179 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 DOCK7Q96N67 2140 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 OCSTAMPQ9BR26 566 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 FAM212BQ9NTI7 297 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-216ENST00000620854 TINAGQ9UJW2 476 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 PADI1Q9ULC6 663 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 WIF1Q9Y5W5 379 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ABCA7Q8IZY2 2146 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 NBEAQ8NFP9 2946 aa6.16□□□□□ -1.42
NEDD9-216ENST00000620854 ROS1P08922 2347 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 A0A1W2PNR3 127 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 C5orf52A6NGY3 159 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 PHF1O43189 567 aaPredicted RBP6.15□□□□□ -1.42
NEDD9-216ENST00000620854 ZFAND5O76080 213 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 ACKR3P25106 362 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 FCGR2CP31995 323 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 CDAP32320 146 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 OR3A4PP47883 348 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 EFNA3P52797 238 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 NDUFA6P56556 154 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 HSD17B7P56937 341 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 TMEM33P57088 247 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 SSX2Q16385 188 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 SLC22A25Q6T423 547 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 AQP3Q92482 292 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 NXT1Q9UKK6 140 aaKnown RBP6.15□□□□□ -1.42
NEDD9-216ENST00000620854 NCOA6Q14686 2063 aaPredicted RBP6.15□□□□□ -1.42
NEDD9-216ENST00000620854 POLEQ07864 2286 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 ARHGAP21Q5T5U3 1957 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 KIAA2026Q5HYC2 2103 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 A6NCN8 305 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF727A8MUV8 499 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 A8MVM7 634 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 TNFSF14O43557 240 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 FOXS1O43638 330 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 TK1P04183 234 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 RPL12P30050 165 aaKnown RBP6.15□□□□□ -1.42
NEDD9-216ENST00000620854 DCAF7P61962 342 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 SSBP1Q04837 148 aaKnown RBP6.15□□□□□ -1.42
NEDD9-216ENST00000620854 ISXQ2M1V0 245 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 PLAC9Q5JTB6 97 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 TEX30Q5JUR7 227 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 TSPO2Q5TGU0 170 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 BRICD5Q6PL45 260 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 WDFY1Q8IWB7 410 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF561Q8N587 486 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 WDSUB1Q8N9V3 476 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 OR5L1Q8NGL2 311 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 TMEM230Q96A57 120 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 C8orf44Q96CB5 159 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 BSCL2Q96G97 398 aaPredicted RBP6.15□□□□□ -1.42
NEDD9-216ENST00000620854 SLC46A1Q96NT5 459 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 PIGQQ9BRB3 760 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 TMEM9BQ9NQ34 198 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 PLA2G2EQ9NZK7 142 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 FBXL17Q9UF56 701 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 OR14J1Q9UGF5 321 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 FLVCR1Q9Y5Y0 555 aa6.15□□□□□ -1.42
NEDD9-216ENST00000620854 RALGAPA1Q6GYQ0 2036 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 UMAD1C9J7I0 102 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 F8VVB4 439 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 F8VWA3 439 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 DDAH2O95865 285 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 GUSBP08236 651 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 CHATP28329 748 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 LAP3P28838 519 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 GSK3AP49840 483 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 SCAND1P57086 179 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 TAS2R46P59540 309 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 TESK1Q15569 626 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 IL34Q6ZMJ4 242 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 MKXQ8IYA7 352 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 ZDHHC22Q8N966 263 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 DTWD2Q8NBA8 298 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 SLC17A5Q9NRA2 495 aa6.15□□□□□ -1.43
NEDD9-216ENST00000620854 TMEM100Q9NV29 134 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms