RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 ZNF774Q6NX45 483 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 TMEM178AQ8NBL3 297 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 TIMM8BQ9Y5J9 83 aaPredicted RBP11.02□□□□□ -0.65
CDH1-212ENST00000611625 MRPS18BQ9Y676 258 aaKnown RBP11.02□□□□□ -0.65
CDH1-212ENST00000611625 H3BMH7 237 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 H3BP45 60 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 RECKO95980 971 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 TNFSF4P23510 183 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 NFYBP25208 207 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 RFC3P40938 356 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 COL13A1Q5TAT6 717 aaPredicted RBP11.02□□□□□ -0.65
CDH1-212ENST00000611625 D2HGDHQ8N465 521 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 ZNF721Q8TF20 911 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 TMEM68Q96MH6 324 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 UCK1Q9HA47 277 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 RNF150Q9ULK6 438 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 IGHV3-64DA0A0J9YX35 117 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 ZNF732B4DXR9 585 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 SPINT2O43291 252 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 IAPPP10997 89 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 ZNF32P17041 273 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 FCARP24071 287 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 MICBQ29980 383 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 LHFPL5Q8TAF8 219 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 LHX4Q969G2 390 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 ADAT3Q96EY9 351 aaPredicted RBP11.02□□□□□ -0.65
CDH1-212ENST00000611625 SAT2Q96F10 170 aaPredicted RBP11.02□□□□□ -0.65
CDH1-212ENST00000611625 PECRQ9BY49 303 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 AICDAQ9GZX7 198 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 NAA60Q9H7X0 242 aa11.02□□□□□ -0.65
CDH1-212ENST00000611625 H7BYZ3 331 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 EDDM3AQ14507 147 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 SURF2Q15527 256 aaPredicted RBP11.01□□□□□ -0.65
CDH1-212ENST00000611625 WIPI1Q5MNZ9 446 aaPredicted RBP11.01□□□□□ -0.65
CDH1-212ENST00000611625 PTX4Q96A99 478 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 SAMD10Q9BYL1 202 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 SHARPINQ9H0F6 387 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 FAM234AQ9H0X4 552 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 GPR160Q9UJ42 338 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 ZNF391Q9UJN7 358 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 VSIG4Q9Y279 399 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 ZNF727A8MUV8 499 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 PTAFRP25105 342 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 ZNF787Q6DD87 383 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 LSRQ86X29 649 aaPredicted RBP11.01□□□□□ -0.65
CDH1-212ENST00000611625 SKA3Q8IX90 412 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 BTF3L4Q96K17 158 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 UQCC1Q9NVA1 299 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 KLK13Q9UKR3 277 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 TNFSF18Q9UNG2 199 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 MDFIC2A0A1B0GVS7 189 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 DXOO77932 396 aaKnown RBP11.01□□□□□ -0.65
CDH1-212ENST00000611625 HOXA1P49639 335 aaPredicted RBP11.01□□□□□ -0.65
CDH1-212ENST00000611625 LIMK1P53667 647 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 ZNF345Q14585 488 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 HLA-BQ31612 363 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 H2BFWTQ7Z2G1 175 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 SLC22A18ASQ8N1D0 253 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 CRIPAKQ8N1N5 446 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 LIN7CQ9NUP9 197 aaKnown RBP11.01□□□□□ -0.65
CDH1-212ENST00000611625 RASL12Q9NYN1 266 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 PDCD6O75340 191 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 FSTP19883 344 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 RRADP55042 308 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 LINC01590Q5TEZ4 76 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 UHRF2Q96PU4 802 aa11.01□□□□□ -0.65
CDH1-212ENST00000611625 ZSWIM8A7E2V4 1837 aa11□□□□□ -0.65
CDH1-212ENST00000611625 CTSDP07339 412 aaPredicted RBP11□□□□□ -0.65
CDH1-212ENST00000611625 OR5AC1P0C628 307 aa11□□□□□ -0.65
CDH1-212ENST00000611625 TMEM33P57088 247 aa11□□□□□ -0.65
CDH1-212ENST00000611625 MGAT2Q10469 447 aa11□□□□□ -0.65
CDH1-212ENST00000611625 OR8G1Q15617 311 aa11□□□□□ -0.65
CDH1-212ENST00000611625 PDZD11Q5EBL8 140 aa11□□□□□ -0.65
CDH1-212ENST00000611625 ADAD2Q8NCV1 583 aaKnown RBP11□□□□□ -0.65
CDH1-212ENST00000611625 ADPRHL1Q8NDY3 354 aa11□□□□□ -0.65
CDH1-212ENST00000611625 NANPQ8TBE9 248 aa11□□□□□ -0.65
CDH1-212ENST00000611625 MSI2Q96DH6 328 aaKnown RBP11□□□□□ -0.65
CDH1-212ENST00000611625 RASL10BQ96S79 203 aa11□□□□□ -0.65
CDH1-212ENST00000611625 MFRPQ9BY79 579 aa11□□□□□ -0.65
CDH1-212ENST00000611625 HIPK2Q9H2X6 1198 aa11□□□□□ -0.65
CDH1-212ENST00000611625 MED9Q9NWA0 146 aa11□□□□□ -0.65
CDH1-212ENST00000611625 DUSP13Q9UII6 198 aa11□□□□□ -0.65
CDH1-212ENST00000611625 TRBV5-7A0A0A0MS05 114 aa11□□□□□ -0.65
CDH1-212ENST00000611625 BTBD17A6NE02 478 aa11□□□□□ -0.65
CDH1-212ENST00000611625 SNCAP37840 140 aa11□□□□□ -0.65
CDH1-212ENST00000611625 ASCL1P50553 236 aa11□□□□□ -0.65
CDH1-212ENST00000611625 LSM6P62312 80 aaKnown RBP11□□□□□ -0.65
CDH1-212ENST00000611625 OR2B11Q5JQS5 317 aa11□□□□□ -0.65
CDH1-212ENST00000611625 VHLLQ6RSH7 139 aa11□□□□□ -0.65
CDH1-212ENST00000611625 ZNF808Q8N4W9 903 aaPredicted RBP11□□□□□ -0.65
CDH1-212ENST00000611625 APOBEC3DQ96AK3 386 aaPredicted RBP11□□□□□ -0.65
CDH1-212ENST00000611625 GPM6AP51674 278 aa11□□□□□ -0.65
CDH1-212ENST00000611625 RAC1P63000 192 aa11□□□□□ -0.65
CDH1-212ENST00000611625 ROM1Q03395 351 aa11□□□□□ -0.65
CDH1-212ENST00000611625 Q5BKY6 102 aa11□□□□□ -0.65
CDH1-212ENST00000611625 NTNG2Q96CW9 530 aa11□□□□□ -0.65
CDH1-212ENST00000611625 MUCL1Q96DR8 90 aa11□□□□□ -0.65
CDH1-212ENST00000611625 TWSG1Q9GZX9 223 aa11□□□□□ -0.65
CDH1-212ENST00000611625 ANXA10Q9UJ72 324 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms