RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 OR51B6Q9H340 312 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 PLEKHJ1Q9NW61 149 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 F5H5P2 479 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 ERVH48-1M5A8F1 160 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 CCSO14618 274 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 GEMIN2O14893 280 aaKnown RBP12.49□□□□□ -0.41
VRK3-217ENST00000599538 EFSO43281 561 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 AKR1C4P17516 323 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 AMY2BP19961 511 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 NPY4RP50391 375 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 PDZK1IP1Q13113 114 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 FAM189A2Q15884 450 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 C11orf88Q6PI97 169 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 OR1K1Q8NGR3 316 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 DPCDQ9BVM2 203 aaPredicted RBP12.49□□□□□ -0.41
VRK3-217ENST00000599538 KCNN3Q9UGI6 736 aa12.49□□□□□ -0.41
VRK3-217ENST00000599538 A0A1W2PR80 420 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 SERPINA5P05154 406 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 PI3P19957 117 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 TBPP20226 339 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 WNT5AP41221 380 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 FUT6P51993 359 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 BAMBIQ13145 260 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 DAZAP2Q15038 168 aaPredicted RBP12.48□□□□□ -0.41
VRK3-217ENST00000599538 GRK1Q15835 563 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 VAX1Q5SQQ9 334 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 TEX261Q6UWH6 196 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 MYPOPQ86VE0 399 aaPredicted RBP12.48□□□□□ -0.41
VRK3-217ENST00000599538 FBXL14Q8N1E6 418 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 CSNK2A3Q8NEV1 391 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 OR5M9Q8NGP3 310 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 TERB2Q8NHR7 220 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 BCL2L2Q92843 193 aaPredicted RBP12.48□□□□□ -0.41
VRK3-217ENST00000599538 MICU1Q9BPX6 476 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 PAPOLGQ9BWT3 736 aaKnown RBP12.48□□□□□ -0.41
VRK3-217ENST00000599538 ZNF701Q9NV72 531 aaPredicted RBP12.48□□□□□ -0.41
VRK3-217ENST00000599538 U3KQ87 197 aa12.48□□□□□ -0.41
VRK3-217ENST00000599538 C9orf170A2RU37 121 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 LILRA1O75019 489 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 CFDP00746 253 aaPredicted RBP12.47□□□□□ -0.41
VRK3-217ENST00000599538 IGHG3P01860 377 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 COX5BP10606 129 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 MPGP29372 298 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 NPBWR2P48146 333 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 ZMYND11Q15326 602 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 RPUSD3Q6P087 351 aaKnown RBP12.47□□□□□ -0.41
VRK3-217ENST00000599538 LYG2Q86SG7 212 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 BHLHE23Q8NDY6 225 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 OR5H2Q8NGV7 314 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 OR13G1Q8NGZ3 307 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 HPSE2Q8WWQ2 592 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 EMG1Q92979 244 aaKnown RBP12.47□□□□□ -0.41
VRK3-217ENST00000599538 ELMOD3Q96FG2 381 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 WBP1Q96G27 269 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 ZNF75AQ96N20 296 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 SULT4A1Q9BR01 284 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 CLCF1Q9UBD9 225 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 SLC7A11Q9UPY5 501 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 NOP16Q9Y3C1 178 aaKnown RBP12.47□□□□□ -0.41
VRK3-217ENST00000599538 KCNMB2Q9Y691 235 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 NOS1APO75052 506 aaPredicted RBP12.47□□□□□ -0.41
VRK3-217ENST00000599538 SS18L1O75177 396 aaPredicted RBP12.47□□□□□ -0.41
VRK3-217ENST00000599538 CD34P28906 385 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 ARR3P36575 388 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 OR3A2P47893 321 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 ATP1B3P54709 279 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 DHODHQ02127 395 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 PRDX4Q13162 271 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 IGFBP7Q16270 282 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 C6orf183Q5T699 404 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 ZBTB37Q5TC79 503 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 AADACL3Q5VUY0 350 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 MDP1Q86V88 176 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 ZNF611Q8N823 705 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 ZNF680Q8NEM1 530 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 OR51F2Q8NH61 342 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 CASTOR1Q8WTX7 329 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 HS3ST6Q96QI5 342 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 TRIB1Q96RU8 372 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 AK3Q9UIJ7 227 aa12.47□□□□□ -0.41
VRK3-217ENST00000599538 MCRIP1C9JLW8 97 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 IL2RAP01589 272 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 CELA3BP08861 270 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 CEACAM1P13688 526 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 VAMP1P23763 118 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 IL13RA1P78552 427 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 TSC22D1Q15714 1073 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 SLC25A26Q70HW3 274 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 MRPL21Q7Z2W9 205 aaKnown RBP12.46□□□□□ -0.41
VRK3-217ENST00000599538 P4HA3Q7Z4N8 544 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 OR10AD1Q8NGE0 317 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 TMEM230Q96A57 120 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 APOBEC3DQ96AK3 386 aaPredicted RBP12.46□□□□□ -0.41
VRK3-217ENST00000599538 EHFQ9NZC4 300 aa12.46□□□□□ -0.41
VRK3-217ENST00000599538 GPR132Q9UNW8 380 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms