RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ADI1Q9BV57 179 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 UNKLQ9H9P5 680 aaKnown RBP8.66□□□□□ -1.02
CCDC9-203ENST00000596938 GPR173Q9NS66 373 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 POLDIP2Q9Y2S7 368 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 MAB21L2Q9Y586 359 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 PCDHGB1Q9Y5G3 927 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 POMT1Q9Y6A1 747 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 TRBV23-1A0A0A0MS06 115 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 MDFIC2A0A1B0GVS7 189 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ANKRD61A6NGH8 418 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 A6NIN4 97 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 RFPL4AA6NLU0 287 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 POM121CA8CG34 1229 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 RFPL4AL1F8VTS6 287 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 M0R1W7 72 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 SYT7O43581 403 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 SYNGR1O43759 233 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 SERPINA3P01011 423 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 SELLP14151 372 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 PRDX2P32119 198 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 FUT6P51993 359 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ERVK11-1P61568 191 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ACTC1P68032 377 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ACTA1P68133 377 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 SMIM21Q3B7S5 101 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ZIK1Q3SY52 487 aaPredicted RBP8.65□□□□□ -1.02
CCDC9-203ENST00000596938 FDX2Q6P4F2 183 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ACP7Q6ZNF0 438 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 VMO1Q7Z5L0 202 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 PRSS35Q8N3Z0 413 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 Q8N7P7 452 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ZNRF1Q8ND25 227 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 RHOXF1Q8NHV9 184 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 SSMEM1Q8WWF3 244 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 H1FXQ92522 213 aaKnown RBP8.65□□□□□ -1.02
CCDC9-203ENST00000596938 RNF166Q96A37 237 aaPredicted RBP8.65□□□□□ -1.02
CCDC9-203ENST00000596938 RNFT2Q96EX2 444 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 NRIP2Q9BQI9 281 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 C9orf16Q9BUW7 83 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ZNF747Q9BV97 191 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 PKIBQ9C010 78 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 HES4Q9HCC6 221 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 S100A14Q9HCY8 104 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 ONECUT1Q9UBC0 465 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 SLC7A11Q9UPY5 501 aa8.65□□□□□ -1.02
CCDC9-203ENST00000596938 EXOGQ9Y2C4 368 aaKnown RBP8.65□□□□□ -1.02
CCDC9-203ENST00000596938 DAPL1A0PJW8 107 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 SLC16A6O15403 523 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 MPZL2O60487 215 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 TFF1P04155 84 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 ISG15P05161 165 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 MELTFP08582 738 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 UBCP0CG48 685 aaKnown RBP8.64□□□□□ -1.03
CCDC9-203ENST00000596938 NDUFB7P17568 137 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 GABRB1P18505 474 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 IL24Q13007 206 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 UBE2V2Q15819 145 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 TP53I3Q53FA7 332 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 TMEM244Q5VVB8 128 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 ZBTB49Q6ZSB9 765 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 FAM220AQ7Z4H9 259 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 ANGPTL5Q86XS5 388 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 LDLRAD3Q86YD5 345 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 PQLC1Q8N2U9 271 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 PIP4P2Q8N4L2 257 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 ACBD7Q8N6N7 88 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 CD177Q8N6Q3 437 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 OR2G2Q8NGZ5 317 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 SGMS2Q8NHU3 365 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 TBC1D15Q8TC07 691 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 PP6455Q8WZ26 134 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 TNFRSF14Q92956 283 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 ZNF488Q96MN9 340 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 Q96MT0 163 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 MBOAT4Q96T53 435 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 MYCBPQ99417 103 aaPredicted RBP8.64□□□□□ -1.03
CCDC9-203ENST00000596938 SLC29A1Q99808 456 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 METTL8Q9H825 291 aaKnown RBP8.64□□□□□ -1.03
CCDC9-203ENST00000596938 PLEKHA1Q9HB21 404 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 FRRS1LQ9P0K9 344 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 GNG8Q9UK08 70 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 CAB39Q9Y376 341 aaPredicted RBP8.64□□□□□ -1.03
CCDC9-203ENST00000596938 GMPPBQ9Y5P6 360 aa8.64□□□□□ -1.03
CCDC9-203ENST00000596938 A0A0U1RQK1 487 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 LOC100130705A0A1B0GUX0 176 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 RNASEK-C17orf49H0YIS7 233 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 SLC1A7O00341 560 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 GATBO75879 557 aaKnown RBP8.63□□□□□ -1.03
CCDC9-203ENST00000596938 NXPH2O95156 264 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 KNG1P01042 644 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 KIR3DL2P43630 455 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 IER3P46695 156 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 CCR9P51686 369 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 UBE2E1P51965 193 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 OR12D2P58182 307 aa8.63□□□□□ -1.03
CCDC9-203ENST00000596938 RPL15P61313 204 aaKnown RBP8.63□□□□□ -1.03
CCDC9-203ENST00000596938 ACSM1Q08AH1 577 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms