RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PLEKHJ1Q9NW61 149 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 IL36GQ9NZH8 169 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 ZNF230Q9UIE0 474 aaPredicted RBP17.06■□□□□ 0.32
CLIP3-206ENST00000593074 HSF4Q9ULV5 492 aa17.06■□□□□ 0.32
CLIP3-206ENST00000593074 A0A096LPE4 126 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 A0A1W2PPZ6 126 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 HTR3BO95264 441 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 CEACAM1P13688 526 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 VAMP1P23763 118 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 FPR2P25090 351 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 NBL1P41271 181 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 FUT6P51993 359 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 FOXG1P55316 489 aaPredicted RBP17.05■□□□□ 0.32
CLIP3-206ENST00000593074 RNFT1Q5M7Z0 435 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 C9orf135Q5VTT2 229 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 TMEM17Q86X19 198 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 OR5AP2Q8NGF4 316 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 OR13G1Q8NGZ3 307 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 EMG1Q92979 244 aaKnown RBP17.05■□□□□ 0.32
CLIP3-206ENST00000593074 C5orf66Q9H5L9 145 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 OSGIN2Q9Y236 505 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 DBX1A6NMT0 343 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 SERPINA5P05154 406 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 WT1P19544 449 aaPredicted RBP17.05■□□□□ 0.32
CLIP3-206ENST00000593074 OR3A2P47893 321 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 NPY4RP50391 375 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 AADACL3Q5VUY0 350 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 OVCH2Q7RTZ1 564 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 PXT1Q8NFP0 134 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 FDCSPQ8NFU4 85 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 SCGB3A2Q96PL1 93 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 ARL6Q9H0F7 186 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 SLC7A11Q9UPY5 501 aa17.05■□□□□ 0.32
CLIP3-206ENST00000593074 ZNF407Q9C0G0 2248 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 IGKV1-12A0A0C4DH73 117 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 ZNF503-AS2A6NEH8 195 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 OR5H14A6NHG9 310 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 TUBAL3A6NHL2 446 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 CCSO14618 274 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 RP2O75695 350 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 IGKV1D-12P01611 117 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 HLA-HP01893 362 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 ESCO2Q56NI9 601 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 NHLRC3Q5JS37 347 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 PLCXD3Q63HM9 321 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 TMEM65Q6PI78 240 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 MAFIPQ8WZ33 124 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 TMEM230Q96A57 120 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 EHFQ9NZC4 300 aa17.04■□□□□ 0.32
CLIP3-206ENST00000593074 FREM1Q5H8C1 2179 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 PLATP00750 562 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 AGTR1P30556 359 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 ATP1B3P54709 279 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 NSUN5P2Q63ZY6 315 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 RPUSD3Q6P087 351 aaKnown RBP17.03■□□□□ 0.32
CLIP3-206ENST00000593074 CASTOR1Q8WTX7 329 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 MRPS24Q96EL2 167 aaKnown RBP17.03■□□□□ 0.32
CLIP3-206ENST00000593074 WDYHV1Q96HA8 205 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 PDCD10Q9BUL8 212 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 GSX2Q9BZM3 304 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 PPA2Q9H2U2 334 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 ZDHHC11Q9H8X9 412 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 ZNF701Q9NV72 531 aaPredicted RBP17.03■□□□□ 0.32
CLIP3-206ENST00000593074 CSAG2Q9Y5P2 127 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 NOVA1P51513 510 aaKnown RBP17.03■□□□□ 0.32
CLIP3-206ENST00000593074 PDZK1IP1Q13113 114 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 CAMK2BQ13554 666 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 NKAPLQ5M9Q1 402 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 NUFIP2Q7Z417 695 aaKnown RBP17.03■□□□□ 0.32
CLIP3-206ENST00000593074 MFFQ9GZY8 342 aa17.03■□□□□ 0.32
CLIP3-206ENST00000593074 MSTNO14793 375 aa17.02■□□□□ 0.32
CLIP3-206ENST00000593074 RRP8O43159 456 aaKnown RBP17.02■□□□□ 0.32
CLIP3-206ENST00000593074 SLC25A4P12235 298 aa17.02■□□□□ 0.32
CLIP3-206ENST00000593074 CHATP28329 748 aa17.02■□□□□ 0.32
CLIP3-206ENST00000593074 TAF9Q16594 264 aa17.02■□□□□ 0.32
CLIP3-206ENST00000593074 CHRFAM7AQ494W8 412 aa17.02■□□□□ 0.32
CLIP3-206ENST00000593074 MOB3CQ70IA8 216 aa17.02■□□□□ 0.32
CLIP3-206ENST00000593074 PIGCQ92535 297 aa17.02■□□□□ 0.32
CLIP3-206ENST00000593074 RTBDNQ9BSG5 229 aaPredicted RBP17.02■□□□□ 0.32
CLIP3-206ENST00000593074 REPIN1Q9BWE0 567 aaKnown RBP17.02■□□□□ 0.32
CLIP3-206ENST00000593074 SPRR3Q9UBC9 169 aa17.02■□□□□ 0.32
CLIP3-206ENST00000593074 DNAJC13O75165 2243 aa17.02■□□□□ 0.31
CLIP3-206ENST00000593074 SDCBPO00560 298 aaPredicted RBP17.01■□□□□ 0.31
CLIP3-206ENST00000593074 SS18L1O75177 396 aaPredicted RBP17.01■□□□□ 0.31
CLIP3-206ENST00000593074 B3GALNT1O75752 331 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 ARR3P36575 388 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 SURF2Q15527 256 aaPredicted RBP17.01■□□□□ 0.31
CLIP3-206ENST00000593074 C11orf87Q6NUJ2 197 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 ZNF546Q86UE3 836 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 PPP1R1CQ8WVI7 109 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 EDARQ9UNE0 448 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 IGKV1D-8A0A087WSZ0 117 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 C5orf49A4QMS7 147 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 TM4SF5O14894 197 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 MPGP29372 298 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 RAB14P61106 215 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 IGFL2Q6UWQ7 119 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 GSG1LQ6UXU4 331 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 OSR2Q8N2R0 312 aa17.01■□□□□ 0.31
CLIP3-206ENST00000593074 ZSCAN4Q8NAM6 433 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms