RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 PGAM2P15259 253 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 ATF4P18848 351 aaPredicted RBP12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 DTYMKP23919 212 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 SRD5A2P31213 254 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 FOLR3P41439 243 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 TMEM50BP56557 158 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 RAC3P60763 192 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 ENDOGQ14249 297 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 NKAPLQ5M9Q1 402 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 CLEC18BQ6UXF7 455 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 DBX2Q6ZNG2 339 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 TMEM123Q8N131 208 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 TMEM104Q8NE00 496 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 OR2Y1Q8NGV0 311 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 SNIP1Q8TAD8 396 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 CPT1CQ8TCG5 803 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 RELTQ969Z4 430 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 ZNF799Q96GE5 643 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 RBM24Q9BX46 236 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 BANF2Q9H503 90 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 C5orf66Q9H5L9 145 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 EHFQ9NZC4 300 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 GPR160Q9UJ42 338 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 PIGLQ9Y2B2 252 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 KCNIP3Q9Y2W7 256 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 PTRH2Q9Y3E5 179 aaKnown RBP12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 U3KQA8 63 aa12.31□□□□□ -0.44
NEDD4L-223ENST00000588516 NSG1A0A0A6YYJ2 146 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 FOXI3A8MTJ6 420 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 PRSS44E7EML9 344 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 F5H5K5 113 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 STMND1H3BQB6 276 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 APOC3P02656 99 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 CSTBP04080 98 aaKnown RBP12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 P04436 131 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 SERPINA5P05154 406 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 CTSDP07339 412 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 SLC2A1P11166 492 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 COX6A1P12074 109 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 PMELP40967 661 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 NPY4RP50391 375 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 MLF1P58340 268 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 BLOC1S1P78537 153 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 ZNF273Q14593 569 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 ATXN7L3Q14CW9 347 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 LHFPL2Q6ZUX7 228 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 SVBPQ8N300 66 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 GPR137CQ8N3F9 429 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 RELL2Q8NC24 303 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 ST6GALNAC5Q9BVH7 336 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 TMEM100Q9NV29 134 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 PLEKHJ1Q9NW61 149 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 PLEK2Q9NYT0 353 aa12.3□□□□□ -0.44
NEDD4L-223ENST00000588516 PIGBOS1A0A0B4J2F0 54 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 IGKV1-9A0A0C4DH69 117 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 LIPCP11150 499 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 RSU1Q15404 277 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 PRAMEF20Q5VT98 475 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 SULF2Q8IWU5 870 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 ZNF100Q8IYN0 542 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 OR13G1Q8NGZ3 307 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 NABP1Q96AH0 204 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 BARX1Q9HBU1 254 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 OCIAD1Q9NX40 245 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 FOXD3Q9UJU5 478 aaPredicted RBP12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 SLC7A11Q9UPY5 501 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 POMT1Q9Y6A1 747 aa12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 PHF3Q92576 2039 aaKnown RBP12.29□□□□□ -0.44
NEDD4L-223ENST00000588516 B4E171 279 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 ZNF814B7Z6K7 855 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 LGALS8O00214 317 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 SGCEO43556 437 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 ZIC3O60481 467 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 OPN1LWP04000 364 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 TMEM225BP0DP42 221 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 CD79AP11912 226 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 TSPAN7P41732 249 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 MTCP1P56278 107 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 LY6DQ14210 128 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 RIPPLY2Q5TAB7 128 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 PXDC1Q5TGL8 231 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 SPACA3Q8IXA5 215 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 SPAG16Q8N0X2 631 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 OR1F12Q8NHA8 337 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 SPACA5Q96QH8 159 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 PLEKHA2Q9HB19 425 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 MMP26Q9NRE1 261 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 NECAP2Q9NVZ3 263 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 ZNF319Q9P2F9 582 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 TIMM10BQ9Y5J6 103 aa12.28□□□□□ -0.44
NEDD4L-223ENST00000588516 OR6C6A6NF89 314 aa12.27□□□□□ -0.45
NEDD4L-223ENST00000588516 NTN3O00634 580 aaPredicted RBP12.27□□□□□ -0.45
NEDD4L-223ENST00000588516 ABCD4O14678 606 aa12.27□□□□□ -0.45
NEDD4L-223ENST00000588516 GAPDHP04406 335 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-223ENST00000588516 HPNP05981 417 aa12.27□□□□□ -0.45
NEDD4L-223ENST00000588516 CTRB1P17538 263 aa12.27□□□□□ -0.45
NEDD4L-223ENST00000588516 SERPINA2P20848 420 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms