RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 TK1P04183 234 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 FAHP16930 419 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 ALOX5APP20292 161 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 SLC2A5P22732 501 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 MPZP25189 248 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 ERVK11-1P61568 191 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 EGFEM1PQ0D2K5 195 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 MICAQ29983 383 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 SMIM21Q3B7S5 101 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 SAMD4BQ5PRF9 694 aaKnown RBP11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 TMEM42Q69YG0 159 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 CALHM1Q8IU99 346 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 DTX3Q8N9I9 347 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 OR5A2Q8NGI9 324 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 FOXRED1Q96CU9 486 aaPredicted RBP11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 CDRT15Q96T59 188 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 PRSS22Q9GZN4 317 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 U3KQV3 271 aa11.06□□□□□ -0.64
CLPTM1-208ENST00000588274 SACSQ9NZJ4 4579 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 A0A1W2PRX2 142 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 MEX3AA1L020 520 aaKnown RBP11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 J3QT63 122 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 SRSF10O75494 262 aaKnown RBP11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 RBP4P02753 201 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 PRDX2P32119 198 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 CAPZA1P52907 286 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 SSX2Q16385 188 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 PLBD1Q6P4A8 553 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 CYP2R1Q6VVX0 501 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 BBS1Q8NFJ9 593 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 RPS4Y2Q8TD47 263 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 MALSU1Q96EH3 234 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 TEAD3Q99594 435 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 OR51V1Q9H2C8 321 aa11.05□□□□□ -0.64
CLPTM1-208ENST00000588274 PQLC2LA1A4F0 135 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 SLC1A7O00341 560 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 PRODHO43272 600 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 ARG1P05089 322 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 IGHV1-8P0DP01 117 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 PIPP12273 146 aaPredicted RBP11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 CD33P20138 364 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 MAP2K3P46734 347 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 HCCSP53701 268 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 LGALS4P56470 323 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 MFGE8Q08431 387 aaPredicted RBP11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 PLCXD3Q63HM9 321 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 LCN8Q6JVE9 175 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 CPLX4Q7Z7G2 160 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 BATF2Q8N1L9 274 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 OR2T27Q8NH04 317 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 ZNF671Q8TAW3 534 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 THEM6Q8WUY1 208 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 GPR84Q9NQS5 396 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 INPP5EQ9NRR6 644 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 ACTR3BQ9P1U1 418 aa11.04□□□□□ -0.64
CLPTM1-208ENST00000588274 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 HUWE1Q7Z6Z7 4374 aaKnown RBP11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 A0A1W2PPH5 198 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 F8VVB4 439 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 F8VWA3 439 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 K7N7A8 449 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 TTRP02766 147 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 ATP6V1B1P15313 513 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 PAICSP22234 425 aaKnown RBP11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 VDAC2P45880 294 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 HAAOP46952 286 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 ROM1Q03395 351 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 OR2T5Q6IEZ7 315 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 ETV3LQ6ZN32 361 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 Q6ZSR3 168 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 MOB3CQ70IA8 216 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 OR5AU1Q8NGC0 362 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 OR10G2Q8NGC3 310 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 OR2T29Q8NH02 315 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 TEX47Q8TBZ9 253 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 OR51E1Q8TCB6 317 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 ITFG2Q969R8 447 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 HIST1H2AAQ96QV6 131 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 FEVQ99581 238 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 ELAC2Q9BQ52 826 aaKnown RBP11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 PBOV1Q9GZY1 135 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 MAGIXQ9H6Y5 334 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 ARL8BQ9NVJ2 186 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 NUFIP1Q9UHK0 495 aaKnown RBP11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 PITPNC1Q9UKF7 332 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 COPS3Q9UNS2 423 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 SAMHD1Q9Y3Z3 626 aaKnown RBP11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 DNAH7Q8WXX0 4024 aa11.03□□□□□ -0.64
CLPTM1-208ENST00000588274 ARRDC5A6NEK1 342 aa11.02□□□□□ -0.65
CLPTM1-208ENST00000588274 CCDC182A6NF36 153 aa11.02□□□□□ -0.65
CLPTM1-208ENST00000588274 ACOD1A6NK06 481 aa11.02□□□□□ -0.65
CLPTM1-208ENST00000588274 PSMD9O00233 223 aa11.02□□□□□ -0.65
CLPTM1-208ENST00000588274 DHRS3O75911 302 aa11.02□□□□□ -0.65
CLPTM1-208ENST00000588274 AMY1AP04745 511 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms