RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SAXO1Q8IYX7 474 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CELF2-AS1Q8N7Q2 184 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 WDR31Q8NA23 367 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 CHST4Q8NCG5 386 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 UBASH3BQ8TF42 649 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 SEH1LQ96EE3 360 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 SPACA5Q96QH8 159 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 NEURL2Q9BR09 285 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 TM2D1Q9BX74 207 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 LPAR5Q9H1C0 372 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 MMP28Q9H239 520 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 HRASLSQ9HDD0 168 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.95□□□□□ -0.98
LIG3-203ENST00000585370 KLK11Q9UBX7 282 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 TINAGQ9UJW2 476 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 FAM215AQ9Y5M1 114 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 ARHGAP21Q5T5U3 1957 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 FREM1Q5H8C1 2179 aa8.95□□□□□ -0.98
LIG3-203ENST00000585370 FAM230AA0A1W2PPH8 454 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 HMX3A6NHT5 357 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 OR5H1A6NKK0 313 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 ZNHIT1O43257 154 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 TPD52L2O43399 206 aaKnown RBP8.94□□□□□ -0.98
LIG3-203ENST00000585370 SSX4O60224 188 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 TOXO94900 526 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 CSTBP04080 98 aaKnown RBP8.94□□□□□ -0.98
LIG3-203ENST00000585370 HNRNPCP07910 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
LIG3-203ENST00000585370 GTF2F2P13984 249 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 RAC2P15153 192 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 MGMTP16455 207 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 PSMB1P20618 241 aaKnown RBP8.94□□□□□ -0.98
LIG3-203ENST00000585370 VEGFCP49767 419 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 ZP1P60852 638 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 PDZK1IP1Q13113 114 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 RSU1Q15404 277 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 PCGF3Q3KNV8 242 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 SLC22A6Q4U2R8 563 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 RNASE12Q5GAN4 147 aaKnown RBP8.94□□□□□ -0.98
LIG3-203ENST00000585370 TIMM23BQ5SRD1 257 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 PLCXD3Q63HM9 321 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 TMEM211Q6ICI0 200 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 MTFR2Q6P444 385 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 CRIP3Q6Q6R5 217 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 Q6ZTK2 550 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 BIVMQ86UB2 503 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 CXorf67Q86X51 503 aaPredicted RBP8.94□□□□□ -0.98
LIG3-203ENST00000585370 ZDHHC23Q8IYP9 409 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 ACBD4Q8NC06 268 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 OR56B2PQ8NGI1 322 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 OR51T1Q8NGJ9 327 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 OR56B4Q8NH76 319 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 RAB3CQ96E17 227 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 SELENOIQ9C0D9 397 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 PTTG3PQ9NZH4 202 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 ZNF629Q9UEG4 869 aaPredicted RBP8.94□□□□□ -0.98
LIG3-203ENST00000585370 C2CD3Q4AC94 2353 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 MTORP42345 2549 aa8.94□□□□□ -0.98
LIG3-203ENST00000585370 SPG11Q96JI7 2443 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 OR5B21A6NL26 309 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 ZNF850A8MQ14 1090 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 SERPINE3A8MV23 424 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 C19orf84I3L1E1 186 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 PRAF2O60831 178 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 CYB5AP00167 134 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 NGFP01138 241 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 IGLV1-44P01699 117 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 GLI4P10075 376 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 CCL2P13500 99 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 TBPP20226 339 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 IL32P24001 234 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 GIFP27352 417 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 BTCP35070 178 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 WNT5AP41221 380 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 IDH3GP51553 393 aaPredicted RBP8.93□□□□□ -0.98
LIG3-203ENST00000585370 CASP6P55212 293 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 UCP2P55851 309 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 RAB25P57735 213 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 PPP1CBP62140 327 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 PRDX4Q13162 271 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 MEF2DQ14814 521 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 TMEM200AQ86VY9 491 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 DOLPP1Q86YN1 238 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 MKXQ8IYA7 352 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 ZNF295-AS1Q8N0V1 137 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 TMEM104Q8NE00 496 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 Q8NFD4 153 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 NPRL2Q8WTW4 380 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 MUCL1Q96DR8 90 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 GAL3ST1Q99999 423 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 PAPOLGQ9BWT3 736 aaKnown RBP8.93□□□□□ -0.98
LIG3-203ENST00000585370 BCL2L14Q9BZR8 327 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 OPN3Q9H1Y3 402 aaPredicted RBP8.93□□□□□ -0.98
LIG3-203ENST00000585370 OR10A4Q9H209 315 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 KCNK15Q9H427 330 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 ELL3Q9HB65 397 aaPredicted RBP8.93□□□□□ -0.98
LIG3-203ENST00000585370 RHOFQ9HBH0 211 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 ELOVL5Q9NYP7 299 aa8.93□□□□□ -0.98
LIG3-203ENST00000585370 MRPL15Q9P015 296 aaKnown RBP8.93□□□□□ -0.98
LIG3-203ENST00000585370 MYEF2Q9P2K5 600 aaKnown RBP8.93□□□□□ -0.98
LIG3-203ENST00000585370 MEMO1Q9Y316 297 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms