RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 CSPG4Q6UVK1 2322 aa12.68□□□□□ -0.38
MKS1-210ENST00000581180 IGHV4-61A0A0C4DH41 118 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.67□□□□□ -0.38
MKS1-210ENST00000581180 WNT9BO14905 357 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 SYNGR1O43759 233 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 NOS1APO75052 506 aaPredicted RBP12.67□□□□□ -0.38
MKS1-210ENST00000581180 ACAA1P09110 424 aaPredicted RBP12.67□□□□□ -0.38
MKS1-210ENST00000581180 GALP22466 123 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 BDKRB2P30411 391 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 ZP1P60852 638 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 BTG1P62324 171 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 PPP3R1P63098 170 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 IL24Q13007 206 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 ZMYND11Q15326 602 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 KISS1Q15726 138 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 PEG10Q86TG7 708 aaKnown RBP12.67□□□□□ -0.38
MKS1-210ENST00000581180 LRRC28Q86X40 367 aaPredicted RBP12.67□□□□□ -0.38
MKS1-210ENST00000581180 OR52N4Q8NGI2 321 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 ZNF671Q8TAW3 534 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 TIMD4Q96H15 378 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 MRPS26Q9BYN8 205 aaKnown RBP12.67□□□□□ -0.38
MKS1-210ENST00000581180 TMEM165Q9HC07 324 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 NEK6Q9HC98 313 aa12.67□□□□□ -0.38
MKS1-210ENST00000581180 F8P00451 2351 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 PPIAL4EA0A075B759 164 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 RNF223E7ERA6 249 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 PPIAL4DF5H284 164 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 C3orf80F5H4A9 247 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 LGALS8O00214 317 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 AKR7A2O43488 359 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 ZNF205O95201 554 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 HCKP08631 526 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 OCMP0CE72 109 aaPredicted RBP12.66□□□□□ -0.38
MKS1-210ENST00000581180 PGA5P0DJD9 388 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 PPIAL4FP0DN26 164 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 CD80P33681 288 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 LOXL1Q08397 574 aaPredicted RBP12.66□□□□□ -0.38
MKS1-210ENST00000581180 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 TEX36Q5VZQ5 186 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 LRRTM1Q86UE6 522 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 LYPD6Q86Y78 171 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 POC1AQ8NBT0 407 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 C19orf18Q8NEA5 215 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 POLDIP2Q9Y2S7 368 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 PPIAL4AQ9Y536 164 aa12.66□□□□□ -0.38
MKS1-210ENST00000581180 TNFRSF13BO14836 293 aaPredicted RBP12.65□□□□□ -0.38
MKS1-210ENST00000581180 CD37P11049 281 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 CD36P16671 472 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 ADRA2CP18825 462 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 SRMP19623 302 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 USF1P22415 310 aaPredicted RBP12.65□□□□□ -0.38
MKS1-210ENST00000581180 FGF9P31371 208 aaPredicted RBP12.65□□□□□ -0.38
MKS1-210ENST00000581180 MDH2P40926 338 aaKnown RBP12.65□□□□□ -0.38
MKS1-210ENST00000581180 POU3F4P49335 361 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 ERVK11-1P61568 191 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 PDZK1IP1Q13113 114 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 ZNF404Q494X3 552 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 TMEM155Q4W5P6 130 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 DDI2Q5TDH0 399 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 SLC25A26Q70HW3 274 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 CIARTQ8N365 385 aaPredicted RBP12.65□□□□□ -0.38
MKS1-210ENST00000581180 BOLLQ8N9W6 283 aaKnown RBP12.65□□□□□ -0.38
MKS1-210ENST00000581180 CLDND2Q8NHS1 167 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 YIPF6Q96EC8 236 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 ZNF488Q96MN9 340 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 NRIP2Q9BQI9 281 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 WDR13Q9H1Z4 485 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 MTCH1Q9NZJ7 389 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 STUB1Q9UNE7 303 aa12.65□□□□□ -0.38
MKS1-210ENST00000581180 CELSR1Q9NYQ6 3014 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 IGKV1-12A0A0C4DH73 117 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 SHISA3A0PJX4 238 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 OOEPA6NGQ2 149 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 H7C1Q1 480 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 MAGEB3O15480 346 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 SPRY1O43609 319 aaPredicted RBP12.64□□□□□ -0.39
MKS1-210ENST00000581180 ARL6IP5O75915 188 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 PLATP00750 562 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 IGKV1D-12P01611 117 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 MAS1P04201 325 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 TFAP2AP05549 437 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 ZNF93P35789 620 aaPredicted RBP12.64□□□□□ -0.39
MKS1-210ENST00000581180 ALDH3B2P48448 385 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 LMO4P61968 165 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 SFRP4Q6FHJ7 346 aaPredicted RBP12.64□□□□□ -0.39
MKS1-210ENST00000581180 CDH26Q8IXH8 852 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 ZSCAN4Q8NAM6 433 aaPredicted RBP12.64□□□□□ -0.39
MKS1-210ENST00000581180 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 OR13F1Q8NGS4 319 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 SEH1LQ96EE3 360 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 COX4I2Q96KJ9 171 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 NKX3-1Q99801 234 aaPredicted RBP12.64□□□□□ -0.39
MKS1-210ENST00000581180 TMEM246Q9BRR3 403 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 OR51E2Q9H255 320 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 HES4Q9HCC6 221 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 TCF7L1Q9HCS4 588 aa12.64□□□□□ -0.39
MKS1-210ENST00000581180 TXNL4BQ9NX01 149 aaKnown RBP12.64□□□□□ -0.39
MKS1-210ENST00000581180 HIVEP1P15822 2718 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms