RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 BLCAPP62952 87 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 DCTN2Q13561 401 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF273Q14593 569 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 PLCXD3Q63HM9 321 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF626Q68DY1 528 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF770Q6IQ21 691 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 COMMD2Q86X83 199 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 CD177Q8N6Q3 437 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 THEM6Q8WUY1 208 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 DPF1Q92782 380 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 GPR61Q9BZJ8 451 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 MUC13Q9H3R2 512 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 MED20Q9H944 212 aa9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 TSSC4Q9Y5U2 329 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-212ENST00000576613 A0A0U1RQV5 110 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 TCRBV4S1A1TA0A5B7 111 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 C17orf98A8MV24 154 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 ODF3BA8MYP8 253 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 GSC2O15499 205 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 SYNGR1O43759 233 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 NXPH2O95156 264 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 TK1P04183 234 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 PIPP12273 146 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 ATP6V1B1P15313 513 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 RIPPLY1Q0D2K3 151 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 DYNC1I2Q13409 638 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 TMEM95Q3KNT9 176 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 LCN8Q6JVE9 175 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 MOB3CQ70IA8 216 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 KRT74Q7RTS7 529 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 CENPVQ7Z7K6 275 aaPredicted RBP9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF573Q86YE8 665 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR11H6Q8NGC7 330 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 TEX47Q8TBZ9 253 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 AKR1E2Q96JD6 320 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 B9D2Q9BPU9 175 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR51V1Q9H2C8 321 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 CCDC134Q9H6E4 229 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 POLDIP2Q9Y2S7 368 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 RYR3Q15413 4870 aa9.36□□□□□ -0.91
CTDNEP1-212ENST00000576613 WI2-2373I1.2A0A1W2PRP0 233 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 ACOD1A6NK06 481 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 J3QT63 122 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 PGA5P0DJD9 388 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF728P0DKX0 622 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 H2AFXP16104 143 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 PRDX6P30041 224 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 HAAOP46952 286 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 CEBPDP49716 269 aaPredicted RBP9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 DLX6P56179 175 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 SLC34A1Q06495 639 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF684Q5T5D7 378 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 MINOS1Q5TGZ0 78 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 LCN1P1Q5VSP4 162 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 Q6ZS46 218 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 CCDC121Q6ZUS5 278 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 KRT77Q7Z794 578 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR4X2Q8NGF9 303 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 CAPSLQ8WWF8 208 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF488Q96MN9 340 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 DGCR6LQ9BY27 220 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR14J1Q9UGF5 321 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 ENPP5Q9UJA9 477 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 MINOS1-NBL1R4GNA1 71 aa9.35□□□□□ -0.91
CTDNEP1-212ENST00000576613 PRR23D1E9PI22 279 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 H3BN98 237 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 PRODHO43272 600 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 SELENOFO60613 162 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 NOS1APO75052 506 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 DNAJC8O75937 253 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 PRR23D2P0DMB1 279 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 IGHV1-8P0DP01 117 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 KRTAP10-11P60412 298 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 EGFEM1PQ0D2K5 195 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 IL18R1Q13478 541 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 MICAQ29983 383 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 DMRTC1Q5HYR2 192 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 KHDC1LQ5JSQ8 128 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 KCTD18Q6PI47 426 aaPredicted RBP9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 GDPD3Q7L5L3 318 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 C16orf82Q7Z2V1 217 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 TRPM8Q7Z2W7 1104 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 PIGWQ7Z7B1 504 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 PGAM4Q8N0Y7 254 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 ASCC1Q8N9N2 400 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 NDNFQ8TB73 568 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 ZNF714Q96N38 554 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 OR8B4Q96RC9 309 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 NRIP2Q9BQI9 281 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 REEP1Q9H902 201 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 LAMP5Q9UJQ1 280 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 PIGLQ9Y2B2 252 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 SAMHD1Q9Y3Z3 626 aaKnown RBP9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 HILPDAQ9Y5L2 63 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 U3KQV3 271 aa9.34□□□□□ -0.91
CTDNEP1-212ENST00000576613 TMEM269A0A1B0GVZ9 245 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 K7N7A8 449 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 SASH3O75995 380 aa9.33□□□□□ -0.92
CTDNEP1-212ENST00000576613 NRASP01111 189 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms