RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CSF3RQ99062 836 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 FOXC2Q99958 501 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 OR51J1Q9H342 316 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 RNF121Q9H920 327 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 PELI2Q9HAT8 420 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 SLCO1B3Q9NPD5 702 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 MAP1LC3B2A6NCE7 125 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 F6UZH7 168 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 K7ERU9 68 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 RDH16O75452 317 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 TACSTD2P09758 323 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 AK4P27144 223 aaPredicted RBP4.07□□□□□ -1.76
SMG1-207ENST00000563235 OPRD1P41143 372 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 TGFBR3Q03167 851 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 MEF2DQ14814 521 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 DUSP6Q16828 381 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 VMACQ2NL98 169 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 ANXA2RQ3ZCQ2 193 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 C1orf195Q5TG92 126 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 HBMQ6B0K9 141 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 FRRS1Q6ZNA5 592 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 PAQR4Q8N4S7 273 aaPredicted RBP4.07□□□□□ -1.76
SMG1-207ENST00000563235 OR13C4Q8NGS5 318 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 OR4X1Q8NH49 305 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 ARRDC2Q8TBH0 407 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 ZNF502Q8TBZ5 544 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 TFB1MQ8WVM0 346 aaKnown RBP4.07□□□□□ -1.76
SMG1-207ENST00000563235 CMSS1Q9BQ75 279 aaKnown RBP4.07□□□□□ -1.76
SMG1-207ENST00000563235 SUCNR1Q9BXA5 334 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 MAP1LC3BQ9GZQ8 125 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 MSL2Q9HCI7 577 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 IDI2-AS1Q9NZ38 188 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 SLC7A7Q9UM01 511 aa4.07□□□□□ -1.76
SMG1-207ENST00000563235 LAMB2P55268 1798 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 RPS10-NUDT3A0A1W2PQS6 291 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 K7EMT4 169 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 DVL1O14640 695 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 ORC5O43913 435 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 LSM8O95777 96 aaKnown RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 NUDT3O95989 172 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 CD8AP01732 235 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 IGHG4P01861 327 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 PVRP15151 417 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 SFTPDP35247 375 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 ARL4AP40617 200 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 DVL1P1P54792 670 aaPredicted RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 OR1D5P58170 312 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 CDKL1Q00532 357 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 EMX1Q04741 257 aaPredicted RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 SMAGPQ0VAQ4 97 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 PRSS8Q16651 343 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 TRMT12Q53H54 448 aaKnown RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 PYCR3Q53H96 274 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 RAB6CQ53S08 254 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 CLEC12AQ5QGZ9 265 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 DCST2Q5T1A1 773 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 OR4A47Q6IF82 309 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 ALKAL1Q6UXT8 129 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 HSD11B1LQ7Z5J1 315 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 ZNF614Q8N883 585 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 B3GALNT2Q8NCR0 500 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 TSTD1Q8NFU3 115 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 OLIG1Q8TAK6 271 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 ZFP90Q8TF47 636 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 RPUSD4Q96CM3 377 aaKnown RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 OXGR1Q96P68 337 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 RAB6CQ9H0N0 254 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 SSR3Q9UNL2 185 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 TRAPPC4Q9Y296 219 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 PKIGQ9Y2B9 76 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 U3KQ87 197 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 MEIOCA2RUB1 952 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 OR5H1A6NKK0 313 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 CEACAM18A8MTB9 384 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 J3QRK9 145 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 KIR2DS3K7RE56 304 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 CLIC1O00299 241 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 RFPL2O75678 378 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 HSD17B1P14061 328 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 HIST1H1TP22492 207 aaPredicted RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 ADMP35318 185 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 UBE2E1P51965 193 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 TCTAP57738 103 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 ERVFRD-1P60508 538 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 SUMO2P61956 95 aaKnown RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 IFITM3Q01628 133 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 KIR2DS3Q14952 304 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 RBMS2Q15434 407 aaKnown RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 LEG1Q6P5S2 330 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 DHRS11Q6UWP2 260 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 Q6ZRG5 221 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 STRADAQ7RTN6 431 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 OR8G5Q8NG78 346 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 OR52E4Q8NGH9 312 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 OR4D11Q8NGI4 311 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 OR6F1Q8NGZ6 308 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 LRRC58Q96CX6 371 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 UBE2E2Q96LR5 201 aa4.06□□□□□ -1.76
SMG1-207ENST00000563235 GFM1Q96RP9 751 aaKnown RBP4.06□□□□□ -1.76
SMG1-207ENST00000563235 APOL4Q9BPW4 351 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms