RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ADAMTS17Q8TE56 1095 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 PARD6GQ9BYG4 376 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 LAT2Q9GZY6 243 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 AKAP12Q02952 1782 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 LOC389332A0A1B0GUA5 103 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 INSM1Q01101 510 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 ARIH2OSQ8N7S6 290 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 ATOH8Q96SQ7 321 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 PRSS37A4D1T9 235 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 ACSM5Q6NUN0 579 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 C12orf54Q6X4T0 127 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 PIANPQ8IYJ0 282 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 ARRDC1Q8N5I2 433 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 KLF16Q9BXK1 252 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 CTSCP53634 463 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 AQP6Q13520 282 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 GLDNQ6ZMI3 551 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 UBTD2Q8WUN7 234 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 SARAFQ96BY9 339 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 MAP6Q96JE9 813 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 CTRCQ99895 268 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 RAXQ9Y2V3 346 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 LNP1A1A4G5 178 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 ADAMTSL4Q6UY14 1074 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLC16A13Q7RTY0 426 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR2W3Q7Z3T1 314 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 NEURL2Q9BR09 285 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 RASL12Q9NYN1 266 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 IGHV3-64DA0A0J9YX35 117 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 LIM2P55344 173 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 ARL6IP6Q8N6S5 226 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 PRRX2Q99811 253 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 GABRG3Q99928 467 aa12.47□□□□□ -0.41
CSPG4P12-202ENST00000559989 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 HAND1O96004 215 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 DUSP5Q16690 384 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR2Z1Q8NG97 314 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 KISS1RQ969F8 398 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 SIRT7Q9NRC8 400 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 LANCL1O43813 399 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 FCGR3BO75015 233 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 EPXP11678 715 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 HLA-GP17693 338 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 DUSP2Q05923 314 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 PELI3Q8N2H9 469 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR1N1Q8NGS0 311 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 SNRNP40Q96DI7 357 aaKnown RBP12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR2W1Q9Y3N9 320 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 GSTZ1O43708 216 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 RRN3P1Q2M238 152 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 TMEM215Q68D42 235 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 CDCA4Q9BXL8 241 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 CES1P1Q9UKY3 287 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 FGF8P55075 233 aaPredicted RBP12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 TMEM99Q8N816 258 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 ST8SIA1Q92185 356 aa12.46□□□□□ -0.41
CSPG4P12-202ENST00000559989 NPIPB6E9PJ23 425 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 K7EQS6 105 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 PPP1R17O96001 155 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 DHRS4L2Q6PKH6 230 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 C3orf85A0A1B0GTC6 90 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 CACNG7P62955 275 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 FUT7Q11130 342 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 PAQR6Q6TCH4 344 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 TMEM64Q6YI46 380 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 SIRT6Q8N6T7 355 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 BCORP1Q8N888 145 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 SNX22Q96L94 193 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 TMPRSS13Q9BYE2 586 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 KIR3DX1Q9H7L2 352 aa12.46□□□□□ -0.42
CSPG4P12-202ENST00000559989 SPRY3O43610 288 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 DYNLT3P51808 116 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 MICBQ29980 383 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 NKAIN1Q4KMZ8 207 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 FBXL6Q8N531 539 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 SPACA5Q96QH8 159 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 COA4Q9NYJ1 87 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 FAM74A7A6NL05 159 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 SMAD6O43541 496 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLC19A1P41440 591 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 SPANXN1Q5VSR9 72 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 SIGIRRQ6IA17 410 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 PRSS50Q9UI38 385 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 EMCNQ9ULC0 261 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 DUSP8Q13202 625 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 MRM1Q6IN84 353 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 SYS1Q8N2H4 156 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 TEX101Q9BY14 249 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 DCCP43146 1447 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 GBGT1Q8N5D6 347 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 MEGF10Q96KG7 1140 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 ANKRD36CQ5JPF3 1778 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 C11orf94C9JXX5 98 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 PYCARD-AS1I3L0S3 204 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 INHBBP09529 407 aa12.45□□□□□ -0.42
CSPG4P12-202ENST00000559989 TM4SF1P30408 202 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms