RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CDAP32320 146 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 EIF1P41567 113 aaKnown RBP14.27□□□□□ -0.12
SHMT2-232ENST00000557487 IL13RA2Q14627 380 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 SYT13Q7L8C5 426 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 FOXRED2Q8IWF2 684 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 GJC3Q8NFK1 279 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 OR1J1Q8NGS3 322 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 SECTM1Q8WVN6 248 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 ZNF501Q96CX3 271 aaPredicted RBP14.27□□□□□ -0.12
SHMT2-232ENST00000557487 ZNF701Q9NV72 531 aaPredicted RBP14.27□□□□□ -0.12
SHMT2-232ENST00000557487 ANXA10Q9UJ72 324 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 ATXN7L1Q9ULK2 861 aaPredicted RBP14.27□□□□□ -0.12
SHMT2-232ENST00000557487 B3GALT1Q9Y5Z6 326 aa14.27□□□□□ -0.12
SHMT2-232ENST00000557487 EXPH5Q8NEV8 1989 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 IGHV1OR15-9A0A0B4J2B8 117 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 AQP7P3A6NL99 342 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 DHRS7CA6NNS2 312 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 SERPINA2P20848 420 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 MSR1P21757 451 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 MAS1LP35410 378 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 OR1D5P58170 312 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 MFAP5Q13361 173 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 MIDNQ504T8 468 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 AWAT1Q58HT5 328 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 CRIP3Q6Q6R5 217 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 RABEPKQ7Z6M1 372 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 STT3BQ8TCJ2 826 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 ZNF160Q9HCG1 818 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 NECAP2Q9NVZ3 263 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 PLEKHJ1Q9NW61 149 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 LSM5Q9Y4Y9 91 aaKnown RBP14.27□□□□□ -0.13
SHMT2-232ENST00000557487 ADAMTS9Q9P2N4 1935 aa14.27□□□□□ -0.13
SHMT2-232ENST00000557487 METTL12A8MUP2 240 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 H7C1Q1 480 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 FABP1P07148 127 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 ZNF806P0C7X5 589 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 FCGR2AP12318 317 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 SLC35A1P78382 337 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 RHBDD2Q6NTF9 364 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 PLXDC2Q6UX71 529 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 FOXL2NBQ6ZUU3 175 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 C1QL2Q7Z5L3 287 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 FAM219AQ8IW50 185 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 Q96M66 194 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 IER2Q9BTL4 223 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 SCRT1Q9BWW7 348 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 NAA60Q9H7X0 242 aa14.26□□□□□ -0.13
SHMT2-232ENST00000557487 PHF3Q92576 2039 aaKnown RBP14.25□□□□□ -0.13
SHMT2-232ENST00000557487 HEXBP07686 556 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 OR5H8P0DN80 308 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 ZNF14P17017 642 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-232ENST00000557487 RAB5AP20339 215 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 LMO1P25800 156 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 CAMLGP49069 296 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 C10orf128Q5T292 105 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 GALNTL5Q7Z4T8 443 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 C1QL4Q86Z23 238 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 NANPQ8TBE9 248 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 TCTEX1D2Q8WW35 142 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 MRPL24Q96A35 216 aaKnown RBP14.25□□□□□ -0.13
SHMT2-232ENST00000557487 SPSB1Q96BD6 273 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 LYZL4Q96KX0 146 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 DUSP15Q9H1R2 295 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-232ENST00000557487 FGF21Q9NSA1 209 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 S100PP25815 95 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 HIST1H3AP68431 136 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 UBE2V2Q15819 145 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 HIST2H3PS2Q5TEC6 136 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 CARD17Q5XLA6 110 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 RPUSD3Q6P087 351 aaKnown RBP14.25□□□□□ -0.13
SHMT2-232ENST00000557487 C16orf47Q6ZP98 133 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-232ENST00000557487 TSTD1Q8NFU3 115 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 OR8G5Q8NG78 346 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 NTNG2Q96CW9 530 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 ANGPTL4Q9BY76 406 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 METTL9Q9H1A3 318 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 SLC35B3Q9H1N7 401 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 NELFAQ9H3P2 528 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 METTL7AQ9H8H3 244 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 C19orf12Q9NSK7 152 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 RP1P56715 2156 aa14.25□□□□□ -0.13
SHMT2-232ENST00000557487 IGHV3-20A0A0C4DH32 117 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 TRBV11-1A0A0K0K1C0 115 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 IGHV2-5P01817 119 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 MBPP02686 304 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-232ENST00000557487 GLAP06280 429 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 SNRNP70P08621 437 aaKnown RBP14.24□□□□□ -0.13
SHMT2-232ENST00000557487 ZNF728P0DKX0 622 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 DUSP1P28562 367 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 OTX1P32242 354 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-232ENST00000557487 PTGDSP41222 190 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 TMEM187Q14656 261 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 ABCA11PQ4W5N1 156 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 WDR74Q6RFH5 385 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-232ENST00000557487 OR2M3Q8NG83 312 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 OR5D18Q8NGL1 313 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 SLC22A8Q8TCC7 542 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 MAFIPQ8WZ33 124 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 SYT3Q9BQG1 590 aa14.24□□□□□ -0.13
SHMT2-232ENST00000557487 OR51M1Q9H341 326 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms