RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PRR23D1E9PI22 279 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-210ENST00000557431 MTRF1O75570 445 aaKnown RBP11.36□□□□□ -0.59
SLIRP-210ENST00000557431 ARG1P05089 322 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 PRR23D2P0DMB1 279 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-210ENST00000557431 MAP2K3P46734 347 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 LGALS4P56470 323 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 RPS7P62081 194 aaKnown RBP11.36□□□□□ -0.59
SLIRP-210ENST00000557431 SNCBQ16143 134 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 SSX2Q16385 188 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 ARSJQ5FYB0 599 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-210ENST00000557431 C11orf88Q6PI97 169 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 TRPM8Q7Z2W7 1104 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 KRT77Q7Z794 578 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 PAPD5Q8NDF8 572 aaKnown RBP11.36□□□□□ -0.59
SLIRP-210ENST00000557431 OR4S1Q8NGB4 309 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 ZNF671Q8TAW3 534 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 OR51E1Q8TCB6 317 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
SLIRP-210ENST00000557431 C1orf21Q9H246 121 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 HEXA-AS1Q9H8Q6 139 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 ABCB9Q9NP78 766 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 GPR84Q9NQS5 396 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 GPR173Q9NS66 373 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
SLIRP-210ENST00000557431 A6NDX4 124 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 H3BSH0 61 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 MAGEB4O15481 346 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-210ENST00000557431 XPNPEP2O43895 674 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 INMTO95050 263 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 PRDX2P32119 198 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 DLX6P56179 175 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 BLCAPP62952 87 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 MFGE8Q08431 387 aaPredicted RBP11.35□□□□□ -0.59
SLIRP-210ENST00000557431 GINS1Q14691 196 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 CNN3Q15417 329 aaKnown RBP11.35□□□□□ -0.59
SLIRP-210ENST00000557431 CEACAM21Q3KPI0 293 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 TMEM236Q5W0B7 351 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 CPOQ8IVL8 374 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 HS3ST5Q8IZT8 346 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 POC1AQ8NBT0 407 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 FEVQ99581 238 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 TEAD3Q99594 435 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 MUC13Q9H3R2 512 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 FAM206AQ9NX38 181 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 USE1Q9NZ43 259 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 COPS3Q9UNS2 423 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 PIGLQ9Y2B2 252 aa11.35□□□□□ -0.59
SLIRP-210ENST00000557431 KMT2CQ8NEZ4 4911 aaKnown RBP11.35□□□□□ -0.59
SLIRP-210ENST00000557431 FAM90A8PA6NJQ4 464 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 K7EIL1 84 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 PGA5P0DJD9 388 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 CD33P20138 364 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 ALOX5APP20292 161 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 PAICSP22234 425 aaKnown RBP11.34□□□□□ -0.59
SLIRP-210ENST00000557431 HAAOP46952 286 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 MS4A2Q01362 244 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 TRIM25Q14258 630 aaKnown RBP11.34□□□□□ -0.59
SLIRP-210ENST00000557431 AANATQ16613 207 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 SMIM21Q3B7S5 101 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 PLEKHG7Q6ZR37 379 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 OR5A2Q8NGI9 324 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 GIPC3Q8TF64 312 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 OR8B4Q96RC9 309 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 PBOV1Q9GZY1 135 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 LAMP5Q9UJQ1 280 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 GTF2A1LQ9UNN4 478 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
SLIRP-210ENST00000557431 TMEM269A0A1B0GVZ9 245 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 OR5B21A6NL26 309 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 ODF3BA8MYP8 253 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 SLC1A7O00341 560 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 PEX14O75381 377 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 NXPH2O95156 264 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 TK1P04183 234 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 SLC2A5P22732 501 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 COL10A1Q03692 680 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 EMX1Q04741 257 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-210ENST00000557431 DYNC1I2Q13409 638 aaKnown RBP11.33□□□□□ -0.6
SLIRP-210ENST00000557431 APOFQ13790 326 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 LCN8Q6JVE9 175 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 LIAT1Q6ZQX7 453 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 ASRGL1Q7L266 308 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 TCF23Q7RTU1 214 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 DHFR2Q86XF0 187 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 Q8N2B8 174 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF561Q8N587 486 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 TPRX1Q8N7U7 411 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF454Q8N9F8 522 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 OR4F17Q8NGA8 305 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 TRMT10AQ8TBZ6 339 aaKnown RBP11.33□□□□□ -0.6
SLIRP-210ENST00000557431 OR4F4Q96R69 305 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 WNT10AQ9GZT5 417 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 ABCB10Q9NRK6 738 aa11.33□□□□□ -0.6
SLIRP-210ENST00000557431 A0A0U1RQV5 110 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 SH2D7A6NKC9 451 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-210ENST00000557431 C17orf98A8MV24 154 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 F8VVB4 439 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 F8VWA3 439 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms