RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 SRD5A2P31213 254 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 PSG4Q00888 419 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 ZNF92Q03936 586 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 SSBP1Q04837 148 aaKnown RBP13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 LY6G6FQ5SQ64 297 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 TMEM88Q6PEY1 159 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 FGFBP3Q8TAT2 258 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 M1APQ8TC57 530 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 BOD1L1Q8NFC6 3051 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 LOC102725191A0A1B0GVB3 256 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 WIPF3A6NGB9 483 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 EPHA1P21709 976 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 CAV2P51636 162 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 PIGPP57054 158 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 LSM6P62312 80 aaKnown RBP13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 STK11Q15831 433 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 SIGIRRQ6IA17 410 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 OR56B2PQ8NGI1 322 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 OR6S1Q8NH40 331 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 PP6455Q8WZ26 134 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 GUCD1Q96NT3 240 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 ARPC5LQ9BPX5 153 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 ZNF700Q9H0M5 742 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 LNP1A1A4G5 178 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 PHF1O43189 567 aaPredicted RBP13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 ZNF735P0CB33 412 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 ZNF44P15621 663 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 ZBTB25P24278 435 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 CCL11P51671 97 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 IGFBP7Q16270 282 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 SKA3Q8IX90 412 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 FOXJ2Q9P0K8 574 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 UBE2J1Q9Y385 318 aaPredicted RBP13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 NPTNQ9Y639 398 aa13.4□□□□□ -0.26
TMEM55B-207ENST00000557041 LRP4O75096 1905 aa13.4□□□□□ -0.27
TMEM55B-207ENST00000557041 APC2O95996 2303 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 TRAV39A0A0B4J263 110 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 DHRS7CA6NNS2 312 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 HMSDA8MTL9 139 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 F8W036 122 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 WRBO00258 174 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 SRSF10O75494 262 aaKnown RBP13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 THBS4P35443 961 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 RPS27AP62979 156 aaKnown RBP13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 UBA52P62987 128 aaKnown RBP13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 BLOC1S1P78537 153 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 C5orf24Q7Z6I8 188 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 SIGLEC12Q96PQ1 595 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 WDR13Q9H1Z4 485 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 SLC7A10Q9NS82 523 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 TRAV14DV4A0A0A6YYC5 116 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 DUS4LO95620 317 aaKnown RBP13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 CYCSP99999 105 aaKnown RBP13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 OR2W3Q7Z3T1 314 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 STPG2Q8N412 459 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 FADS6Q8N9I5 356 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 OR13G1Q8NGZ3 307 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 SLAMF9Q96A28 289 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 SLC5A7Q9GZV3 580 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 C5orf66Q9H5L9 145 aa13.39□□□□□ -0.27
TMEM55B-207ENST00000557041 DSPP15924 2871 aaKnown RBP13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 ZNF728P0DKX0 622 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 TPT1P13693 172 aaKnown RBP13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 FOXG1P55316 489 aaPredicted RBP13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 CCDC36Q8IYA8 594 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 MITD1Q8WV92 249 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 C10orf142B7Z368 130 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 ZNF587BE7ETH6 402 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 ZNF17P17021 662 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 P2RY4P51582 365 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 ZXDAP98168 799 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 NHLRC3Q5JS37 347 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 HAGHLQ6PII5 290 aaPredicted RBP13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 WDR5BQ86VZ2 330 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 HAS2Q92819 552 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 ESRP2Q9H6T0 727 aaKnown RBP13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 NBEAQ8NFP9 2946 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 IGKV1D-8A0A087WSZ0 117 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 SERPINA7P05543 415 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 PCBD1P61457 104 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 RAB1AP62820 205 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 Q0VFX4 171 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 TRA2AQ13595 282 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 DRAM2Q6UX65 266 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 OR5AP2Q8NGF4 316 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 APH1AQ96BI3 265 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 CHST5Q9GZS9 411 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 SLC26A1Q9H2B4 701 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 TMEM38BQ9NVV0 291 aa13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 TNRC18O15417 2968 aaPredicted RBP13.38□□□□□ -0.27
TMEM55B-207ENST00000557041 CNOT4O95628 575 aaKnown RBP13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 IFNA2P01563 188 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 PRKACBP22694 351 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 NTF4P34130 210 aa13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 PPIAP62937 165 aaKnown RBP13.37□□□□□ -0.27
TMEM55B-207ENST00000557041 SSPNQ14714 243 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms