RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	LIN7C	Q9NUP9	197 aa	Known RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	FAM118A	Q9NWS6	357 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	WARS2	Q9UGM6	360 aa	Known RBP	3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	GNG8	Q9UK08	70 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	KLHDC2	Q9Y2U9	406 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	LRP12	Q9Y561	859 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	TMEM14A	Q9Y6G1	99 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	CELSR1	Q9NYQ6	3014 aa		3.92	□□□□□ -1.78
ATXN3-238	ENST00000556288	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	3.92	□□□□□ -1.78	4e-12	■■■□□ 18.3
ATXN3-238	ENST00000556288	ABCA2	Q9BZC7	2435 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	IGHV4-61	A0A0C4DH41	118 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288		A0A1W2PQL4	384 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	CCDC182	A6NF36	153 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	METTL15	A6NJ78	407 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	LRRC30	A6NM36	301 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF850	A8MQ14	1090 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288		A8MV72	311 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	IQCF6	A8MYZ5	107 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	INAFM1	C9JVW0	142 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	LOC110117498-PIK3R3	F6TDL0	507 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	NDUFS8	O00217	210 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	P2RY10	O00398	339 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	PHYH	O14832	338 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	WNT9B	O14905	357 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ATP6V1G2	O95670	118 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	CLIC3	O95833	236 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	TACSTD2	P09758	323 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR2T7	P0C7T2	308 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	OCM2	P0CE71	109 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	OCM	P0CE72	109 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ALOX5AP	P20292	161 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	KITLG	P21583	273 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ACHE	P22303	614 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	HTR1F	P30939	366 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	IL2RG	P31785	369 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	MTNR1A	P48039	350 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	SLC3A1	Q07837	685 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	LOXL1	Q08397	574 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	MZT1	Q08AG7	82 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	KLF9	Q13886	244 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR8B8	Q15620	311 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	TMEM249	Q2WGJ8	235 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF829	Q3KNS6	432 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ANXA2R	Q3ZCQ2	193 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	TP53I3	Q53FA7	332 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	KLHL22	Q53GT1	634 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	TMEM255A	Q5JRV8	349 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	BCL2L15	Q5TBC7	163 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	PXDC1	Q5TGL8	231 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	AADACL4	Q5VUY2	407 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	PRAMEF6	Q5VXH4	476 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	CSPG4	Q6UVK1	2322 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	FBXW12	Q6X9E4	464 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	IL17REL	Q6ZVW7	336 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	FAM220A	Q7Z4H9	259 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ZNF679	Q8IYX0	411 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR56B2P	Q8NGI1	322 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR52H1	Q8NGJ2	320 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR2T27	Q8NH04	317 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	OR51E1	Q8TCB6	317 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	RNF133	Q8WVZ7	376 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	TRUB1	Q8WWH5	349 aa	Known RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	FAHD2A	Q96GK7	314 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	RNF170	Q96K19	258 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	MBOAT4	Q96T53	435 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	GAL3ST1	Q99999	423 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ARPC5L	Q9BPX5	153 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	PAPOLG	Q9BWT3	736 aa	Known RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	BEX2	Q9BXY8	128 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	GABARAPL3	Q9BY60	117 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	PBOV1	Q9GZY1	135 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	VCX	Q9H320	206 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	DCLRE1B	Q9H816	532 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	NIPAL2	Q9H841	368 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	MARCH7	Q9H992	704 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ADGRL4	Q9HBW9	690 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	C1orf123	Q9NWV4	160 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	SMPD3	Q9NY59	655 aa	Predicted RBP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	USE1	Q9NZ43	259 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	IL19	Q9UHD0	177 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	ATPIF1	Q9UII2	106 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	COPS3	Q9UNS2	423 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	PIGL	Q9Y2B2	252 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	NAV3	Q8IVL0	2385 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	CSMD2	Q7Z408	3487 aa		3.91	□□□□□ -1.78
ATXN3-238	ENST00000556288	TLN2	Q9Y4G6	2542 aa		3.9	□□□□□ -1.78
ATXN3-238	ENST00000556288	PPIAL4E	A0A075B759	164 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	IGHV3OR15-7	A0A075B7D8	119 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288		A0A1B0GVI7	797 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	FAM230A	A0A1W2PPH8	454 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	FAM90A18P	A6NE21	464 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	FAM90A16P	A6NEW6	464 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	HMX3	A6NHT5	357 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	ANXA2P2	A6NMY6	339 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	FAM90A9P	A6NNJ1	464 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	VGLL3	A8MV65	326 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	FAM90A5P	A8MXJ8	464 aa		3.9	□□□□□ -1.79
ATXN3-238	ENST00000556288	PPIAL4D	F5H284	164 aa		3.9	□□□□□ -1.79

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