RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 COPS3Q9UNS2 423 aa11.57□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TCF19Q9Y242 345 aa11.57□□□□□ -0.56
CHMP4BP1-201ENST00000556017 RYR3Q15413 4870 aa11.57□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ARRDC5A6NEK1 342 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 CCDC182A6NF36 153 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PRR23D1E9PI22 279 aaPredicted RBP11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 H3BN98 237 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 FBXO24O75426 580 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PRR23D2P0DMB1 279 aaPredicted RBP11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 LOXL3P58215 753 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ERVK11-1P61568 191 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 MFGE8Q08431 387 aaPredicted RBP11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 C16orf89Q6UX73 402 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 HS3ST5Q8IZT8 346 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ZNF561Q8N587 486 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PAPD5Q8NDF8 572 aaKnown RBP11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ZNF671Q8TAW3 534 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 OR51E1Q8TCB6 317 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 GIPC3Q8TF64 312 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 NKX3-1Q99801 234 aaPredicted RBP11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 NRIP2Q9BQI9 281 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 HEXA-AS1Q9H8Q6 139 aa11.56□□□□□ -0.56
CHMP4BP1-201ENST00000556017 A0A1B0GTI1 187 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PQLC2LA1A4F0 135 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ACOD1A6NK06 481 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ZNF737O75373 536 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TTRP02766 147 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TK1P04183 234 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 MPZP25189 248 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 BLCAPP62952 87 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ROM1Q03395 351 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TRIM25Q14258 630 aaKnown RBP11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TMEM95Q3KNT9 176 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TMEM236Q5W0B7 351 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ZNF626Q68DY1 528 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 DEGS2Q6QHC5 323 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 Q6ZSR3 168 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 MOB3CQ70IA8 216 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 NDUFA11Q86Y39 141 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ADGRG5Q8IZF4 528 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 BATF2Q8N1L9 274 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 WFDC9Q8NEX5 89 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 OR2T27Q8NH04 317 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 HIST1H2AAQ96QV6 131 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 YIPF3Q9GZM5 350 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PBOV1Q9GZY1 135 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 NECAP2Q9NVZ3 263 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 USE1Q9NZ43 259 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 NUFIP1Q9UHK0 495 aaKnown RBP11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PIGLQ9Y2B2 252 aa11.55□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TMEM269A0A1B0GVZ9 245 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 MEX3AA1L020 520 aaKnown RBP11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 F8VVB4 439 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 F8VWA3 439 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ATP6V1B1P15313 513 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 CAPZA1P52907 286 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 CNN3Q15417 329 aaKnown RBP11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 SMIM21Q3B7S5 101 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 HSP90B2PQ58FF3 399 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TCTEX1D4Q5JR98 221 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 SLC35D3Q5M8T2 416 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ZBTB37Q5TC79 503 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 FOXB2Q5VYV0 432 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PLCXD3Q63HM9 321 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 KRT77Q7Z794 578 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 CPLX4Q7Z7G2 160 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 DHFR2Q86XF0 187 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 CALHM1Q8IU99 346 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 FAM81AQ8TBF8 368 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 R3HDM4Q96D70 268 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 TTTY10Q9BZA0 68 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 LAMP5Q9UJQ1 280 aa11.54□□□□□ -0.56
CHMP4BP1-201ENST00000556017 J3QT63 122 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 K7EIL1 84 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 K7N7A8 449 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 MAGEB4O15481 346 aaPredicted RBP11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 XPNPEP2O43895 674 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 DHRS3O75911 302 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 NRASP01111 189 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 T-ENOLP0DO92 83 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PIPP12273 146 aaPredicted RBP11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 OSMP13725 252 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 PAICSP22234 425 aaKnown RBP11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 HAAOP46952 286 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 DYNLT3P51808 116 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 CD83Q01151 205 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 EMX1Q04741 257 aaPredicted RBP11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 RIPPLY1Q0D2K3 151 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 APOFQ13790 326 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 GK3PQ14409 553 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 SSX2Q16385 188 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 OR14K1Q8NGZ2 314 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 ITFG2Q969R8 447 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 OR5M11Q96RB7 305 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 CHID1Q9BWS9 393 aa11.53□□□□□ -0.56
CHMP4BP1-201ENST00000556017 MUC13Q9H3R2 512 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms