RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 MUC1P15941 1255 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-212ENST00000554467 PDZK1IP1Q13113 114 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF124Q15973 351 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 Q3ZCU0 254 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 SLC22A6Q4U2R8 563 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 OR5AS1Q8N127 324 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 PAQR4Q8N4S7 273 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-212ENST00000554467 TMEM104Q8NE00 496 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 GPER1Q99527 375 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 FOXB1Q99853 325 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 ASCL3Q9NQ33 180 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 IGKV1-9A0A0C4DH69 117 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 WIPF3A6NGB9 483 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 CYTIPO60759 359 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 NDUFB6O95139 128 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 IL5P05113 134 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 HPNP05981 417 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 CCL2P13500 99 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 PRF1P14222 555 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 PRSS3P35030 304 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 SKA3Q8IX90 412 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 PIGTQ969N2 578 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 GPR35Q9HC97 309 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 SLC7A10Q9NS82 523 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 ZFP57Q9NU63 452 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 MEGF11A6BM72 1044 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 F5H5P2 479 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 MRPL33O75394 65 aaKnown RBP10.19□□□□□ -0.78
SHMT2-212ENST00000554467 AMY2AP04746 511 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 VSIG8P0DPA2 414 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 LUMP51884 338 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-212ENST00000554467 MRPS34P82930 218 aaKnown RBP10.19□□□□□ -0.78
SHMT2-212ENST00000554467 FAM27BQ5VT28 67 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 LYPD6Q86Y78 171 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 MDS2Q8NDY4 140 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 OR2AK2Q8NG84 335 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 SGK3Q96BR1 496 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 PDCD10Q9BUL8 212 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 C12orf49Q9H741 205 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 CDRT15L2A8MXV6 281 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 CCSO14618 274 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 NME2P1O60361 137 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 MGMTP16455 207 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 NME2P22392 152 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 CCNOP22674 350 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 HTR5AP47898 357 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 GLIPR1L1Q6UWM5 242 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 SLC16A14Q7RTX9 510 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 SLC22A24Q8N4F4 322 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 FDCSPQ8NFU4 85 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 OR4S1Q8NGB4 309 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 SEC22AQ96IW7 307 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF552Q9H707 407 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-212ENST00000554467 ACKR4Q9NPB9 350 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 PIGLQ9Y2B2 252 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 NAP1L6A6NFF2 107 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 H7C417 338 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 SNAPC5O75971 98 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 LCATP04180 440 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 GNB3P16520 340 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 S100PP25815 95 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 PSG4Q00888 419 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF766Q5HY98 468 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 C9orf152Q5JTZ5 239 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 C1orf100Q5SVJ3 147 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 OLFML2AQ68BL7 652 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 C1QL2Q7Z5L3 287 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 OR14K1Q8NGZ2 314 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 NUDCD2Q8WVJ2 157 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 MOB1AQ9H8S9 216 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 MTFP1Q9UDX5 166 aa10.19□□□□□ -0.78
SHMT2-212ENST00000554467 DNPH1O43598 174 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 LY86O95711 162 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 MPIG6BO95866 241 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 FBP1P09467 338 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF708P17019 499 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF133P52736 654 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-212ENST00000554467 CAPZA1P52907 286 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 FOXL2NBQ6ZUU3 175 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 GVQW1Q8N7I0 195 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 NKAIN3Q8N8D7 197 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 PIGMQ9H3S5 423 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 TMEM231Q9H6L2 316 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 LDLRAD4O15165 306 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 CD46P15529 392 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 SPINK2P20155 84 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 ACKR3P25106 362 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 SSTP61278 116 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 UBE2V2Q15819 145 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 LY6G6FQ5SQ64 297 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 DOK3Q7L591 496 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 CASTOR1Q8WTX7 329 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 SEH1LQ96EE3 360 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 ELL3Q9HB65 397 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-212ENST00000554467 GPR173Q9NS66 373 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 DCAF16Q9NXF7 216 aa10.18□□□□□ -0.78
SHMT2-212ENST00000554467 MRPS28Q9Y2Q9 187 aaKnown RBP10.18□□□□□ -0.78
SHMT2-212ENST00000554467 KLF13Q9Y2Y9 288 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-212ENST00000554467 LOC390937A0A1W2PQ73 354 aa10.17□□□□□ -0.78
SHMT2-212ENST00000554467 KLRC4-KLRK1H3BQV0 150 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms