RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 INSIG2Q9Y5U4 225 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 MGAM2Q2M2H8 2515 aa7.43□□□□□ -1.22
TDP1-208ENST00000553989 ARHGAP32A7KAX9 2087 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 TRAV27A0A087WT01 109 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 TRAV40A0A0B4J280 105 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 INMT-MINDY4F8WBC2 141 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 TRAPPC2LH3BP13 241 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 BHLHE40O14503 412 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 XKRYO14609 159 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 PDCD5O14737 125 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 OGG1O15527 345 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 SGCEO43556 437 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 IGF2P01344 180 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 PF4P02776 101 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
TDP1-208ENST00000553989 ZNF3P17036 446 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 RPL4P36578 427 aaKnown RBP7.42□□□□□ -1.22
TDP1-208ENST00000553989 GPR4P46093 362 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 SLC6A9P48067 706 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 GBX2P52951 348 aaPredicted RBP7.42□□□□□ -1.22
TDP1-208ENST00000553989 GNB2P62879 340 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 MAB21L1Q13394 359 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 DOC2BQ14184 412 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 ENDOGQ14249 297 aaKnown RBP7.42□□□□□ -1.22
TDP1-208ENST00000553989 MIDNQ504T8 468 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 KLF17Q5JT82 389 aaPredicted RBP7.42□□□□□ -1.22
TDP1-208ENST00000553989 SLC35D3Q5M8T2 416 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 PLBD1Q6P4A8 553 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 LEG1Q6P5S2 330 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 TMEM91Q6ZNR0 172 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 KCTD20Q7Z5Y7 419 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 CEACAM19Q7Z692 300 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 OAFQ86UD1 273 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 JAZF1Q86VZ6 243 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 OR5AS1Q8N127 324 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 SYS1Q8N2H4 156 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 ZNF283Q8N7M2 679 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 SLC37A3Q8NCC5 494 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 OR51A7Q8NH64 312 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 PTP4A1Q93096 173 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 CMBLQ96DG6 245 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 ZNF48Q96MX3 618 aaPredicted RBP7.42□□□□□ -1.22
TDP1-208ENST00000553989 OR2V2Q96R30 315 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 THAP7Q9BT49 309 aaPredicted RBP7.42□□□□□ -1.22
TDP1-208ENST00000553989 SSBP3Q9BWW4 388 aaPredicted RBP7.42□□□□□ -1.22
TDP1-208ENST00000553989 HDHD2Q9H0R4 259 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 MMP28Q9H239 520 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 RERGLQ9H628 205 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 TMEM165Q9HC07 324 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 TNFRSF19Q9NS68 423 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 IL19Q9UHD0 177 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 POLR1DQ9Y2S0 133 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 TANC2Q9HCD6 1990 aa7.42□□□□□ -1.22
TDP1-208ENST00000553989 LINC00854A0A1B0GVQ3 168 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 CEACAM18A8MTB9 384 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 A8MXK9 166 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 ZNF205O95201 554 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 GHRHP01286 108 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 C1QBP02746 253 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 IGHV4-38-2P0DP08 117 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 PSKH1P11801 424 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 OMGP23515 440 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 AZGP1P25311 298 aaKnown RBP7.41□□□□□ -1.22
TDP1-208ENST00000553989 ACTA2P62736 377 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 ACTG2P63267 376 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 SLC9A3R2Q15599 337 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 PDLIM3Q53GG5 364 aaPredicted RBP7.41□□□□□ -1.22
TDP1-208ENST00000553989 YIF1BQ5BJH7 314 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 IDNKQ5T6J7 187 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 ZNF57Q68EA5 555 aaPredicted RBP7.41□□□□□ -1.22
TDP1-208ENST00000553989 DMKNQ6E0U4 476 aaPredicted RBP7.41□□□□□ -1.22
TDP1-208ENST00000553989 RPL22L1Q6P5R6 122 aaKnown RBP7.41□□□□□ -1.22
TDP1-208ENST00000553989 LRRN1Q6UXK5 716 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 Q6ZR03 302 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 C17orf107Q6ZR85 190 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 ZNF767PQ75MW2 155 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 NLRC3Q7RTR2 1065 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 SYT9Q86SS6 491 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 SLC7A5P1Q8MH63 180 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 OR10H4Q8NGA5 316 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 OR10AD1Q8NGE0 317 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 OR51G2Q8NGK0 314 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 FANK1Q8TC84 345 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 ZFAND1Q8TCF1 268 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 LIPHQ8WWY8 451 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 TAF15Q92804 592 aaKnown RBP eCLIP7.41□□□□□ -1.22
TDP1-208ENST00000553989 RFT1Q96AA3 541 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 HYLS1Q96M11 299 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 C1orf147Q96MC9 270 aaPredicted RBP7.41□□□□□ -1.22
TDP1-208ENST00000553989 TMEM246Q9BRR3 403 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 POFUT1Q9H488 388 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 RANBP3Q9H6Z4 567 aaPredicted RBP7.41□□□□□ -1.22
TDP1-208ENST00000553989 GRHPRQ9UBQ7 328 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 IL20RAQ9UHF4 553 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 NUFIP1Q9UHK0 495 aaKnown RBP7.41□□□□□ -1.22
TDP1-208ENST00000553989 SIGLEC7Q9Y286 467 aa7.41□□□□□ -1.22
TDP1-208ENST00000553989 IGHV3-64DA0A0J9YX35 117 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 MDFIC2A0A1B0GVS7 189 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 LRRC30A6NM36 301 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 NOTOA8MTQ0 251 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms