RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 UNQ6126/PRO20091Q6UXV3 157 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 ZSCAN4Q8NAM6 433 aaPredicted RBP16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 OR51F2Q8NH61 342 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 IQCF6A8MYZ5 107 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 HTR3BO95264 441 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 SFTPBP07988 381 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 GTF2F2P13984 249 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 TUBG1P23258 451 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 CPT2P23786 658 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 GIFP27352 417 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 C1QTNF12Q5T7M4 302 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 PCSK4Q6UW60 755 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 SLC25A26Q70HW3 274 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 DEDD2Q8WXF8 326 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 BCL2L14Q9BZR8 327 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 TUBG2Q9NRH3 451 aa16.74■□□□□ 0.27
RBFOX1-215ENST00000553186 PKD1L2Q7Z442 2459 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 A0A0B4J293 547 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 BOLA2-SMG1P6H3BVE0 249 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 MFNGO00587 321 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 CSTBP04080 98 aaKnown RBP16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 CSF1P09603 554 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 CA7P43166 264 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 HAAOP46952 286 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 CCR6P51684 374 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 ACTBP60709 375 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 ACTG1P63261 375 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 FJX1Q86VR8 437 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 ARHGAP5-AS1Q96IT6 56 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 HIST1H2AAQ96QV6 131 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 CACNG6Q9BXT2 260 aa16.73■□□□□ 0.27
RBFOX1-215ENST00000553186 GSTP1P09211 210 aaKnown RBP16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 TMEM211Q6ICI0 200 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 FAAP20Q6NZ36 180 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 Q8NFD4 153 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 NUDCD2Q8WVJ2 157 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 CREB3L1Q96BA8 519 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 NEURL2Q9BR09 285 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 DPAGT1Q9H3H5 408 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 TPRP12270 2363 aaKnown RBP16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 SHANK1Q9Y566 2161 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 NAP1L6A6NFF2 107 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 OR5B21A6NL26 309 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 C16orf97H3BN30 126 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 M0R1B8 84 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 SSX5O60225 188 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 FCER2P06734 321 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 BLVRBP30043 206 aaPredicted RBP16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 ALKBH2Q6NS38 261 aa16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.72■□□□□ 0.27
RBFOX1-215ENST00000553186 TCRBP04435 133 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 SELEP16581 610 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 NPBWR2P48146 333 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 CASP6P55212 293 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 GNG3P63215 75 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 SIGIRRQ6IA17 410 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 C1orf174Q8IYL3 243 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 SAXO1Q8IYX7 474 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 OR4D10Q8NGI6 311 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 MRPS24Q96EL2 167 aaKnown RBP16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 CARTPTQ16568 116 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 RSBN1Q5VWQ0 802 aaPredicted RBP16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 SFRP4Q6FHJ7 346 aaPredicted RBP16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 TRAPPC6BQ86SZ2 158 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 TMEM200AQ86VY9 491 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 OR4C16Q8NGL9 310 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 FAM210AQ96ND0 272 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 USB1Q9BQ65 265 aaKnown RBP16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 COPZ2Q9P299 210 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 PURGQ9UJV8 347 aaKnown RBP16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 PCNX1Q96RV3 2341 aa16.71■□□□□ 0.27
RBFOX1-215ENST00000553186 CD3DP04234 171 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 IGFBP7Q16270 282 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 TAF9Q16594 264 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 FAM76BQ5HYJ3 339 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 MBNL2Q5VZF2 373 aaKnown RBP16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 FBXL14Q8N1E6 418 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 OSR2Q8N2R0 312 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 ST8SIA4Q92187 359 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 NUDT15Q9NV35 164 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 ZNF107Q9UII5 783 aaPredicted RBP16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 ERVH48-1M5A8F1 160 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 AKR7A2O43488 359 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 KITLGP21583 273 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 GABRR1P24046 479 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 DAZAP2Q15038 168 aaPredicted RBP16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 PNLIPRP3Q17RR3 467 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 PIGYQ3MUY2 71 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 AGAP6Q5VW22 663 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 GVQW1Q8N7I0 195 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 TMEM229BQ8NBD8 167 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 PECRQ9BY49 303 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 OR51I2Q9H344 312 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 MTCH1Q9NZJ7 389 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 ZNF581Q9P0T4 197 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 NUBP2Q9Y5Y2 271 aa16.7■□□□□ 0.26
RBFOX1-215ENST00000553186 INMT-MINDY4F8WBC2 141 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 CRYAAP02489 173 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 FABP6P51161 128 aa16.69■□□□□ 0.26
RBFOX1-215ENST00000553186 TAS2R19P59542 299 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms