RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 TMEM182Q6ZP80 229 aaPredicted RBP14.38□□□□□ -0.11
CUX1-213ENST00000549414 SDHCQ99643 169 aaPredicted RBP14.38□□□□□ -0.11
CUX1-213ENST00000549414 MRPL22Q9NWU5 206 aaKnown RBP14.38□□□□□ -0.11
CUX1-213ENST00000549414 B3GAT1Q9P2W7 334 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 EDARQ9UNE0 448 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 RFPL4AA6NLU0 287 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 RFPL4AL1F8VTS6 287 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 TTRP02766 147 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 CA6P23280 308 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 ASCL1P50553 236 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 RPL19P84098 196 aaKnown RBP14.37□□□□□ -0.11
CUX1-213ENST00000549414 ADPRHL1Q8NDY3 354 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 TCTEX1D2Q8WW35 142 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 HAS2Q92819 552 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 PLEKHA3Q9HB20 300 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 DECR2Q9NUI1 292 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 RALGAPA1Q6GYQ0 2036 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 LYZL6O75951 148 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 IFNA10P01566 189 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 HLXQ14774 488 aaPredicted RBP14.37□□□□□ -0.11
CUX1-213ENST00000549414 MRGPREQ86SM8 312 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 OR2G3Q8NGZ4 309 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 NOTCH4Q99466 2003 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 IGKV3-11P04433 115 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 LIFP15018 202 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 SSX9Q7RTT3 188 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 SFT2D1Q8WV19 159 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 PLEKHF2Q9H8W4 249 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 FZR1Q9UM11 496 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 POLDIP2Q9Y2S7 368 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 FBXO7Q9Y3I1 522 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 A0A1W2PPV4 95 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 CTDSPLO15194 276 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 OR13C7P0DN81 318 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 TUSC5Q8IXB3 177 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 DNASE2BQ8WZ79 361 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 SLC25A38Q96DW6 304 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 SCMH1Q96GD3 660 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 GPX7Q96SL4 187 aaPredicted RBP14.37□□□□□ -0.11
CUX1-213ENST00000549414 MESP1Q9BRJ9 268 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 PROCRQ9UNN8 238 aa14.37□□□□□ -0.11
CUX1-213ENST00000549414 C9orf170A2RU37 121 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 CHATP28329 748 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 ALDH3B1P43353 468 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 SCAND1P57086 179 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 SOHLH1Q5JUK2 328 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 FLVCR1-AS1Q8TAF5 88 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 GPX8Q8TED1 209 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 FREM3P0C091 2139 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 RNF212BA8MTL3 300 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 CBR1P16152 277 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 STARD6P59095 220 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 Q6ZRG5 221 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 OR2W3Q7Z3T1 314 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 OR11L1Q8NGX0 322 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 M1APQ8TC57 530 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 SAP25Q8TEE9 199 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 UBL7Q96S82 380 aaPredicted RBP14.36□□□□□ -0.11
CUX1-213ENST00000549414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.36□□□□□ -0.113e-7■■■■■ 26.8
CUX1-213ENST00000549414 ELLP55199 621 aaPredicted RBP14.36□□□□□ -0.11
CUX1-213ENST00000549414 IGLV3-21P80748 117 aaPredicted RBP14.36□□□□□ -0.11
CUX1-213ENST00000549414 ZNF266Q14584 549 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 RAB33BQ9H082 229 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 PIGMQ9H3S5 423 aa14.36□□□□□ -0.11
CUX1-213ENST00000549414 IGLV1-36A0A0B4J1U3 117 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 ADAM10O14672 748 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 SULT1A3P0DMM9 295 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 SULT1A4P0DMN0 295 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 ADRA2CP18825 462 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 LIMK1P53667 647 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 PDLIM3Q53GG5 364 aaPredicted RBP14.35□□□□□ -0.11
CUX1-213ENST00000549414 TSPO2Q5TGU0 170 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 CA10Q9NS85 328 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 IAPPP10997 89 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 PRDX4Q13162 271 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 TESK1Q15569 626 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 AANATQ16613 207 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 SPANXN5Q5MJ07 72 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 PLK3Q9H4B4 646 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 BIN3Q9NQY0 253 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 ATP23Q9Y6H3 246 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 RPS10-NUDT3A0A1W2PQS6 291 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 M0R1B8 84 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 SPINT2O43291 252 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 CST7O76096 145 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 TXNDC12O95881 172 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 NDUFB7P17568 137 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 RPS10P46783 165 aaKnown RBP14.35□□□□□ -0.11
CUX1-213ENST00000549414 TGIF1Q15583 401 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 NAA40Q86UY6 237 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 C9orf62Q8N4C0 152 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 HEYLQ9NQ87 328 aaPredicted RBP14.35□□□□□ -0.11
CUX1-213ENST00000549414 WNK2Q9Y3S1 2297 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 B8ZZF3 427 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 SH2D1BO14796 132 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 BAXQ07812 192 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 TMEM88Q6PEY1 159 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 ZDHHC22Q8N966 263 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 OR8U1Q8NH10 309 aa14.35□□□□□ -0.11
CUX1-213ENST00000549414 MAP6Q96JE9 813 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms