RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 EGFEM1PQ0D2K5 195 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 SMIM21Q3B7S5 101 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 ARSJQ5FYB0 599 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 SAMD4BQ5PRF9 694 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 CALHM1Q8IU99 346 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 OR5A2Q8NGI9 324 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 THEM6Q8WUY1 208 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 RCC1LQ96I51 464 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 MYLK2Q9H1R3 596 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 CCDC134Q9H6E4 229 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 TAS2R1Q9NYW7 299 aa14.29□□□□□ -0.12
CLSTN3-214ENST00000542663 OR5B21A6NL26 309 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 CCNB2O95067 398 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 TK1P04183 234 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 PGA5P0DJD9 388 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 PIPP12273 146 aaPredicted RBP14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 TRPM8Q7Z2W7 1104 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 OR11H6Q8NGC7 330 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 CMTM5Q96DZ9 223 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 OR8B4Q96RC9 309 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 C1orf21Q9H246 121 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 INPP5EQ9NRR6 644 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 VNN3Q9NY84 501 aa14.28□□□□□ -0.12
CLSTN3-214ENST00000542663 MEX3AA1L020 520 aaKnown RBP14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 PF4P02776 101 aa14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 CCDC121Q6ZUS5 278 aa14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 MOB3CQ70IA8 216 aa14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 IQCF1Q8N6M8 205 aa14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 FAM81AQ8TBF8 368 aa14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 B9D2Q9BPU9 175 aa14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 DGCR6LQ9BY27 220 aa14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 NIPAL2Q9H841 368 aa14.27□□□□□ -0.13
CLSTN3-214ENST00000542663 A0A0U1RQV5 110 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 NOS1APO75052 506 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 H2AFXP16104 143 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 HOXD3P31249 432 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 MAGEA2P43356 314 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 CD69Q07108 199 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 PLCXD3Q63HM9 321 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 LCN8Q6JVE9 175 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 BATF2Q8N1L9 274 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 ZNF454Q8N9F8 522 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 OR13D1Q8NGV5 346 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 OTULINQ96BN8 352 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 OR51V1Q9H2C8 321 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 ARGLU1Q9NWB6 273 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 HILPDAQ9Y5L2 63 aa14.26□□□□□ -0.13
CLSTN3-214ENST00000542663 FAM90A22PA8MWA6 464 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 F2RL2O00254 374 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 DUS4LO95620 317 aaKnown RBP14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 IGLV3-1P01715 115 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 RBP4P02753 201 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 ALDOBP05062 364 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 ZNF728P0DKX0 622 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 IGHV1-8P0DP01 117 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 PRDX6P30041 224 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 MICAQ29983 383 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 C10orf99Q6UWK7 81 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 TCF23Q7RTU1 214 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 MYDGFQ969H8 173 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 NIPSNAP1Q9BPW8 284 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 NRIP2Q9BQI9 281 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 HES4Q9HCC6 221 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 FAM206AQ9NX38 181 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 OR14J1Q9UGF5 321 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 TSSC4Q9Y5U2 329 aaPredicted RBP14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 U3KQV3 271 aa14.25□□□□□ -0.13
CLSTN3-214ENST00000542663 TCRBV4S1A1TA0A5B7 111 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 J3QT63 122 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 K7N7A8 449 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 NXPH2O95156 264 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 HAAOP46952 286 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 RIPPLY1Q0D2K3 151 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 CENPVQ7Z7K6 275 aaPredicted RBP14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 GPR84Q9NQS5 396 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 PIGLQ9Y2B2 252 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 KIAA2026Q5HYC2 2103 aa14.24□□□□□ -0.13
CLSTN3-214ENST00000542663 ALOX5APP20292 161 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 AZGP1P25311 298 aaKnown RBP14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 HCCSP53701 268 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 OR12D2P58182 307 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 SLC34A1Q06495 639 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 DYNC1I2Q13409 638 aaKnown RBP14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 PLBD1Q6P4A8 553 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 KRT77Q7Z794 578 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 PGAM4Q8N0Y7 254 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 LINC00482Q8N8I6 264 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 TEX47Q8TBZ9 253 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 OR51E1Q8TCB6 317 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 CDRT15Q96T59 188 aa14.23□□□□□ -0.13
CLSTN3-214ENST00000542663 TMEM269A0A1B0GVZ9 245 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 ACOD1A6NK06 481 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 PSMD9O00233 223 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 ZNF737O75373 536 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 NRASP01111 189 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 ATP6V1B1P15313 513 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 ATP6V1B2P21281 511 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 ERVK11-1P61568 191 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 ACTA2P62736 377 aa14.22□□□□□ -0.13
CLSTN3-214ENST00000542663 ACTG2P63267 376 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms