RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 FBLIM1Q8WUP2 373 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 ITPKCQ96DU7 683 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 HIST1H2AAQ96QV6 131 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 TBX15Q96SF7 602 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 ERVK-18Q9QC07 812 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 CTSZQ9UBR2 303 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 SLC22A13Q9Y226 551 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 PIGLQ9Y2B2 252 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 EXOSC1Q9Y3B2 195 aaKnown RBP12.35□□□□□ -0.43
USB1-203ENST00000539737 RNF114Q9Y508 228 aa12.35□□□□□ -0.43
USB1-203ENST00000539737 TRAV38-1A0A0B4J264 116 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 KIR2DS1A0A191URI9 304 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 LOC107986453A0A1B0GWG9 222 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 hCG_1807616A0A1W2PRN6 198 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 EFCAB10A6NFE3 127 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 ZNF850A8MQ14 1090 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 G3V4G9 280 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 M0QZ24 198 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 SYT7O43581 403 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 NDUFA2O43678 99 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 FCN3O75636 299 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 RPSAP08865 295 aaKnown RBP12.34□□□□□ -0.43
USB1-203ENST00000539737 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
USB1-203ENST00000539737 FAHP16930 419 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 PSMB10P40306 273 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 CCR9P51686 369 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 DLX1P56177 255 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 WDR25Q64LD2 544 aaPredicted RBP12.34□□□□□ -0.43
USB1-203ENST00000539737 ZNF841Q6ZN19 808 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 Q6ZSR3 168 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 OR2G2Q8NGZ5 317 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 LINC01006Q8NI28 216 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 OR5P3Q8WZ94 311 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 PIGCQ92535 297 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 PPP1R14AQ96A00 147 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 PELI1Q96FA3 418 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 TECTBQ96PL2 329 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 CNOT2Q9NZN8 540 aaKnown RBP12.34□□□□□ -0.43
USB1-203ENST00000539737 DIMT1Q9UNQ2 313 aaKnown RBP12.34□□□□□ -0.43
USB1-203ENST00000539737 V9GYS6 101 aa12.34□□□□□ -0.43
USB1-203ENST00000539737 A0A0U1RQK1 487 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 A0A1B0GTI1 187 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 OR5B21A6NL26 309 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 LGALS8O00214 317 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 ENSAO43768 121 aaKnown RBP12.33□□□□□ -0.44
USB1-203ENST00000539737 GPR137BO60478 399 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 NDUFA7O95182 113 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 GRPP07492 148 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 LIMS3P0CW19 117 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 LIMS4P0CW20 117 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 CFHR2P36980 270 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 KIR3DL2P43630 455 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 MPPED2Q15777 294 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 ODF4Q2M2E3 257 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 CLVS2Q5SYC1 327 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 GPR157Q5UAW9 335 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 TMEM244Q5VVB8 128 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 PLCXD3Q63HM9 321 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 SFRP4Q6FHJ7 346 aaPredicted RBP12.33□□□□□ -0.44
USB1-203ENST00000539737 IZUMO2Q6UXV1 221 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 TMPRSS11AQ6ZMR5 421 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 PRSS35Q8N3Z0 413 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 OR1M1Q8NGA1 313 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 OR14K1Q8NGZ2 314 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 HPSE2Q8WWQ2 592 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 C10orf35Q96D05 121 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 TMEM80Q96HE8 168 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 ZNF649Q9BS31 505 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 TLNRD1Q9H1K6 362 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 SMURF1Q9HCE7 757 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 C1orf123Q9NWV4 160 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 CHCHD3Q9NX63 227 aaKnown RBP12.33□□□□□ -0.44
USB1-203ENST00000539737 DNAJB11Q9UBS4 358 aa12.33□□□□□ -0.44
USB1-203ENST00000539737 CENPVL3A0A0U1RRI6 287 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 C3orf80F5H4A9 247 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 LIPFP07098 398 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 CCDC159P0C7I6 412 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 GBX2P52951 348 aaPredicted RBP12.32□□□□□ -0.44
USB1-203ENST00000539737 PROK1P58294 105 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 GNG3P63215 75 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 CEACAM21Q3KPI0 293 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 KCTD8Q6ZWB6 473 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 WDR86Q86TI4 376 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
USB1-203ENST00000539737 RNF170Q96K19 258 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 ANKRD60Q9BZ19 345 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 PRDM13Q9H4Q3 707 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 PLCXD1Q9NUJ7 323 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 CAB39Q9Y376 341 aaPredicted RBP12.32□□□□□ -0.44
USB1-203ENST00000539737 RRP15Q9Y3B9 282 aaKnown RBP12.32□□□□□ -0.44
USB1-203ENST00000539737 DNAH3Q8TD57 4116 aa12.32□□□□□ -0.44
USB1-203ENST00000539737 A0A1B0GW55 424 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 TMEM212A6NML5 194 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 ADAM20O43506 726 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 GATBO75879 557 aaKnown RBP12.31□□□□□ -0.44
USB1-203ENST00000539737 NRASP01111 189 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 ISG15P05161 165 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 DUX4L2P0CJ85 424 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms