RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 FABP12A6NFH5 140 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 DPRXA6NFQ7 191 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 SHISA9B4DS77 424 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 M0R135 149 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 HS3ST1O14792 307 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 TPD52L2O43399 206 aaKnown RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 NOS1APO75052 506 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF780AO75290 641 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 CTAG2O75638 210 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 LCATP04180 440 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ADRA2AP08913 450 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 SBK2P0C263 348 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 SLC2A2P11168 524 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 EGR1P18146 543 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ALOX5APP20292 161 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 CFL1P23528 166 aaKnown RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 GABRA5P31644 462 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 HTR2BP41595 481 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 CX3CR1P49238 355 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 INPP1P49441 399 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 RIDAP52758 137 aaKnown RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 WNT4P56705 351 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 PPP1CBP62140 327 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ACTA2P62736 377 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ACTG2P63267 376 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 HIST1H3AP68431 136 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 RAB40BQ12829 278 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 MAB21L1Q13394 359 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 SNTB2Q13425 540 aaKnown RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 TNK1Q13470 666 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 BAK1Q16611 211 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 PCK2Q16822 640 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF672Q499Z4 452 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 CCDC58Q4VC31 144 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 HIST2H3PS2Q5TEC6 136 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 LIPKQ5VXJ0 399 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 SIGIRRQ6IA17 410 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF322Q6U7Q0 402 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 DRAM2Q6UX65 266 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 LRRN1Q6UXK5 716 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF788Q6ZQV5 615 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 HIST2H3AQ71DI3 136 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 KRT77Q7Z794 578 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 MYPOPQ86VE0 399 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 COMMD2Q86X83 199 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 CDC20BQ86Y33 519 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF584Q8IVC4 421 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 PHC2Q8IXK0 858 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 C1orf174Q8IYL3 243 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ACBD7Q8N6N7 88 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF283Q8N7M2 679 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 NANOGP1Q8N7R0 232 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 NUP37Q8NFH4 326 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 OR52H1Q8NGJ2 320 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ST7LQ8TDW4 575 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 SMAP2Q8WU79 429 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 RNF133Q8WVZ7 376 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 AKAP1Q92667 903 aaKnown RBP eCLIP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 APOBEC3DQ96AK3 386 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF799Q96GE5 643 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 POM121L2Q96KW2 1035 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 C4orf45Q96LM5 186 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF75AQ96N20 296 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 TBX5Q99593 518 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 TTTY10Q9BZA0 68 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 BCL2L14Q9BZR8 327 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 MMP28Q9H239 520 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 MIXL1Q9H2W2 232 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 UBTD1Q9HAC8 227 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ABCB9Q9NP78 766 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 PNRC2Q9NPJ4 139 aaKnown RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 INPP5EQ9NRR6 644 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 PLSCR3Q9NRY6 295 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 CA10Q9NS85 328 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 TXNL4BQ9NX01 149 aaKnown RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 CISD1Q9NZ45 108 aaKnown RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 PTTG3PQ9NZH4 202 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 NUFIP1Q9UHK0 495 aaKnown RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 GTF2A1LQ9UNN4 478 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 GSTK1Q9Y2Q3 226 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 KLHDC2Q9Y2U9 406 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ALG5Q9Y673 324 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 UBR5O95071 2799 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-208ENST00000538266 ICE1Q9Y2F5 2266 aa3.69□□□□□ -1.82
SNHG1-208ENST00000538266 FASNP49327 2511 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ANKHD1Q8IWZ3 2542 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 LOC100509620A0A075B734 347 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 A0A0B4J293 547 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 FAM240BA0A1B0GVZ2 78 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 TMEM269A0A1B0GVZ9 245 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 PLSCR5A0PG75 271 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 LYRM1O43325 122 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 SMPD2O60906 423 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ZNF254O75437 659 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 RPP14O95059 124 aaKnown RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 PLAUP00749 431 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ERCC1P07992 297 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-208ENST00000538266 TACSTD2P09758 323 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 OR4A8P0C604 315 aa3.68□□□□□ -1.82
SNHG1-208ENST00000538266 ACSM4P0C7M7 580 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms