RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 STOML3Q8TAV4 291 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 HAVCR1Q96D42 359 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ZC3HAV1LQ96H79 300 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 OR8B4Q96RC9 309 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 NMNAT3Q96T66 252 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CMSS1Q9BQ75 279 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 NAA50Q9GZZ1 169 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 CSTL1Q9H114 145 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 FGF20Q9NP95 211 aaPredicted RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 C20orf141Q9NUB4 165 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 FAM118AQ9NWS6 357 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 SLC23A1Q9UHI7 598 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 NUFIP1Q9UHK0 495 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 ST6GALNAC2Q9UJ37 374 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 PURGQ9UJV8 347 aaKnown RBP3.1□□□□□ -1.91
PTPN22-211ENST00000538253 MYRFQ9Y2G1 1151 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 GRIP1Q9Y3R0 1128 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 R4GMQ9 66 aa3.1□□□□□ -1.91
PTPN22-211ENST00000538253 POLEQ07864 2286 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 NAV2Q8IVL1 2488 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 A0A087WXM4 84 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 TEX13DA0A0J9YY54 714 aaPredicted RBP3.09□□□□□ -1.91
PTPN22-211ENST00000538253 CXorf65A6NEN9 183 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 E9PI62 339 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 SULT1C2O00338 296 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 RGS10O43665 173 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 PRKYO43930 277 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 SCG5P05408 212 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 CECR9P0C854 216 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 RRASP10301 218 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 ERP29P30040 261 aaKnown RBP3.09□□□□□ -1.91
PTPN22-211ENST00000538253 DAPP51397 102 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 ATP5J2P56134 94 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 BLOC1S1P78537 153 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 BSPH1Q075Z2 132 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 TFF3Q07654 80 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 PLA2G7Q13093 441 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 HLXQ14774 488 aaPredicted RBP3.09□□□□□ -1.91
PTPN22-211ENST00000538253 DEFB113Q30KQ7 82 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 SLC35F1Q5T1Q4 408 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 FAHD2BQ6P2I3 314 aaPredicted RBP3.09□□□□□ -1.91
PTPN22-211ENST00000538253 TBPL2Q6SJ96 375 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 LINGO2Q7L985 606 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 TSEN54Q7Z6J9 526 aaKnown RBP3.09□□□□□ -1.91
PTPN22-211ENST00000538253 CMTM4Q8IZR5 234 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 SPAG16Q8N0X2 631 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF676Q8N7Q3 588 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 WDR31Q8NA23 367 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 DNAAF1Q8NEP3 725 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 RHOXF1Q8NHV9 184 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 LINC01560Q8TB33 94 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 ABHD4Q8TB40 342 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 MRGPRDQ8TDS7 321 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 UBASH3BQ8TF42 649 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 C15orf40Q8WUR7 153 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 AP3S1Q92572 193 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 RAB24Q969Q5 203 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 RNFT2Q96EX2 444 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 RRNAD1Q96FB5 475 aaKnown RBP3.09□□□□□ -1.91
PTPN22-211ENST00000538253 FAHD2AQ96GK7 314 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 JMJD8Q96S16 334 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 TEAD3Q99594 435 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 CITED2Q99967 270 aaPredicted RBP3.09□□□□□ -1.91
PTPN22-211ENST00000538253 TCEAL7Q9BRU2 100 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 C1QTNF5Q9BXJ0 243 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 CA10Q9NS85 328 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 STUB1Q9UNE7 303 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 RANBP2P49792 3224 aaKnown RBP3.09□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF462Q96JM2 2506 aa3.09□□□□□ -1.91
PTPN22-211ENST00000538253 TRAV38-1A0A0B4J264 116 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 TMEM129A0AVI4 362 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 A1L4Q6 167 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 C5orf49A4QMS7 147 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 FAM74A7A6NL05 159 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 SOX15O60248 233 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 FOXH1O75593 365 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 SOX14O95416 240 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 MT-ND2P03891 347 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 LPLP06858 475 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 ZNF26P17031 533 aaPredicted RBP3.09□□□□□ -1.92
PTPN22-211ENST00000538253 ANXA7P20073 488 aaKnown RBP3.09□□□□□ -1.92
PTPN22-211ENST00000538253 EEF1B2P24534 225 aaKnown RBP3.09□□□□□ -1.92
PTPN22-211ENST00000538253 CRYBA2P53672 197 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 PLAURQ03405 335 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 FAM74A3Q4VXF1 159 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 ATRAIDQ6UW56 229 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 GDPGP1Q6ZNW5 385 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 ZNF367Q7RTV3 350 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 SLC36A1Q7Z2H8 476 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 LSRQ86X29 649 aaPredicted RBP3.09□□□□□ -1.92
PTPN22-211ENST00000538253 SKA3Q8IX90 412 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 ZFP82Q8N141 532 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 SEMA6DQ8NFY4 1073 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 GPR148Q8TDV2 347 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 C2CD4CQ8TF44 421 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 S100ZQ8WXG8 99 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 DVL3Q92997 716 aaPredicted RBP3.09□□□□□ -1.92
PTPN22-211ENST00000538253 MRGPRFQ96AM1 343 aa3.09□□□□□ -1.92
PTPN22-211ENST00000538253 FYTTD1Q96QD9 318 aaKnown RBP3.09□□□□□ -1.92
PTPN22-211ENST00000538253 RNF2Q99496 336 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms