RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	MS4A18	Q3C1V0	323 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	LRRC37A5P	Q49AS3	106 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	PRR30	Q53SZ7	412 aa	Predicted RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	TMEM268	Q5VZI3	342 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	OR52W1	Q6IF63	320 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	HAGHL	Q6PII5	290 aa	Predicted RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	IGFL3	Q6UXB1	125 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	DCXR	Q7Z4W1	244 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	PPP1R32	Q7Z5V6	425 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	NAA40	Q86UY6	237 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	CBLN2	Q8IUK8	224 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	ZADH2	Q8N4Q0	377 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	ARRDC1	Q8N5I2	433 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	CISD2	Q8N5K1	135 aa	Known RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	OR52N4	Q8NGI2	321 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	MFSD8	Q8NHS3	518 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	ELP5	Q8TE02	316 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	RNF141	Q8WVD5	230 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	DCUN1D4	Q92564	292 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	SNRNP40	Q96DI7	357 aa	Known RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	ADO	Q96SZ5	270 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	SELENOI	Q9C0D9	397 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	EGLN1	Q9GZT9	426 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	SLC5A7	Q9GZV3	580 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	WWTR1	Q9GZV5	400 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	ZNF552	Q9H707	407 aa	Predicted RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	MOB1A	Q9H8S9	216 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	WDR54	Q9H977	334 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	ZMAT3	Q9HA38	289 aa	Known RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	BIN3	Q9NQY0	253 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	PNO1	Q9NRX1	252 aa	Known RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	SLC22A11	Q9NSA0	550 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	CUTC	Q9NTM9	273 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	ZFP57	Q9NU63	452 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	RCC2	Q9P258	522 aa	Known RBP	6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	CTSF	Q9UBX1	484 aa		6.85	□□□□□ -1.31
SPIDR-223	ENST00000524033	UNC79	Q9P2D8	2635 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	MEX3A	A1L020	520 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	ANKUB1	A6NFN9	424 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	EEF1E1-BLOC1S5	C9J1V9	151 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	MASP2	O00187	686 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	OR2T1	O43869	369 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	RAD51D	O75771	328 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SNAPIN	O95295	136 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	ONECUT2	O95948	504 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	CSTB	P04080	98 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	CD5	P06127	495 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	CHRM2	P08172	466 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	HLA-DOB	P13765	273 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	MUC1	P15941	1255 aa	Predicted RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	HIST1H1D	P16402	221 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	ITGA3	P26006	1051 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	IL12B	P29460	328 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	OR1D4	P47884	311 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SULT1A2	P50226	295 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	DAP3	P51398	398 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	NR0B1	P51843	470 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SUMO3	P55854	103 aa	Predicted RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SUPT4H1	P63272	117 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	FMOD	Q06828	376 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	PLCXD2	Q0VAA5	305 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	AIMP2	Q13155	320 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	MRPL49	Q13405	166 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	HYAL4	Q2M3T9	481 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	ANKRD55	Q3KP44	614 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	TMEM128	Q5BJH2	165 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	PLAC9	Q5JTB6	97 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	NKAPL	Q5M9Q1	402 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	H3F3C	Q6NXT2	135 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	CRIP3	Q6Q6R5	217 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	BTNL8	Q6UX41	500 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	UNQ6126/PRO20091	Q6UXV3	157 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SHISA6	Q6ZSJ9	500 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	RHOU	Q7L0Q8	258 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	RNF144B	Q7Z419	303 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	LINC00346	Q8IVM7	164 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SPAG16	Q8N0X2	631 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	METTL27	Q8N6F8	245 aa	Predicted RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	INO80E	Q8NBZ0	244 aa	Predicted RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	ADPRHL1	Q8NDY3	354 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	LYPD6B	Q8NI32	183 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	MARCH1	Q8TCQ1	289 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	PAQR8	Q8TEZ7	354 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	CASTOR1	Q8WTX7	329 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	GLYATL2	Q8WU03	294 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	ST8SIA1	Q92185	356 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	FGGY	Q96C11	551 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SLC25A36	Q96CQ1	311 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SLAMF6	Q96DU3	332 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	MVB12A	Q96EY5	273 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	C2orf50	Q96LR7	162 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	GAL3ST1	Q99999	423 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	ADAT1	Q9BUB4	502 aa	Known RBP	6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	TLNRD1	Q9H1K6	362 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	SLC26A1	Q9H2B4	701 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	C5orf66	Q9H5L9	145 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	CHST11	Q9NPF2	352 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	UQCC1	Q9NVA1	299 aa		6.84	□□□□□ -1.31
SPIDR-223	ENST00000524033	OR5AC2	Q9NZP5	309 aa		6.84	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms