RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 TMEM230Q96A57 120 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 WFDC1Q9HC57 220 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 CLDND1Q9NY35 253 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 HCSTQ9UBK5 93 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 UQCR10Q9UDW1 63 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 TBX21Q9UL17 535 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 ABT1Q9ULW3 272 aaKnown RBP6.46□□□□□ -1.37
CPNE4-208ENST00000511604 WIPI2Q9Y4P8 454 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 NUP210LQ5VU65 1888 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 MKI67P46013 3256 aaKnown RBP6.46□□□□□ -1.38
CPNE4-208ENST00000511604 A0A1B0GV72 72 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 SLC17A2O00624 439 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 SLC16A5O15375 505 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 TBL1XO60907 577 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 ONECUT2O95948 504 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 CTSDP07339 412 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-208ENST00000511604 CT45A8P0DMV1 189 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 CT45A9P0DMV2 189 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 FRKP42685 505 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-208ENST00000511604 MAPK8P45983 427 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 HNRNPA3P51991 378 aaKnown RBP6.46□□□□□ -1.38
CPNE4-208ENST00000511604 BTN3A2P78410 334 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 PLAURQ03405 335 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 PMPCAQ10713 525 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 GGTLC2Q14390 218 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 TMEM176BQ3YBM2 270 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-208ENST00000511604 CT45A2Q5DJT8 189 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 PHF19Q5T6S3 580 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 CST9LP1Q5W188 147 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 Q6ZN92 141 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 Q6ZWC4 215 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 BHLHA15Q7RTS1 189 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-208ENST00000511604 ZNF550Q7Z398 422 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 HOGA1Q86XE5 327 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 SAXO1Q8IYX7 474 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 TMEM256Q8N2U0 113 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 GVQW1Q8N7I0 195 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 OR4B1Q8NGF8 309 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 OR4S2Q8NH73 311 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 VN1R17PQ8TDU5 208 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 ADAMTS15Q8TE58 950 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 PTPMT1Q8WUK0 201 aaPredicted RBP6.46□□□□□ -1.38
CPNE4-208ENST00000511604 PPP1R14AQ96A00 147 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 SUSD3Q96L08 255 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 TNFRSF13CQ96RJ3 184 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 TXN2Q99757 166 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 AICDAQ9GZX7 198 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 LRP12Q9Y561 859 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 OR51B4Q9Y5P0 310 aa6.46□□□□□ -1.38
CPNE4-208ENST00000511604 TRBV5-7A0A0A0MS05 114 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 OR5B21A6NL26 309 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 C4orf51C9J302 202 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 NUPR1O60356 82 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 STC2O76061 302 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 PSMB5P28074 263 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 HINT1P49773 126 aaPredicted RBP6.45□□□□□ -1.38
CPNE4-208ENST00000511604 NCBP2P52298 156 aaKnown RBP eCLIP6.45□□□□□ -1.38
CPNE4-208ENST00000511604 RAB38P57729 211 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 UBE2NP61088 152 aaKnown RBP6.45□□□□□ -1.38
CPNE4-208ENST00000511604 ERVS71-1P61550 626 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 SUPT4H1P63272 117 aaKnown RBP6.45□□□□□ -1.38
CPNE4-208ENST00000511604 PLEKHS1Q5SXH7 462 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 C9orf50Q5SZB4 431 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 SAMD13Q5VXD3 122 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 KLHL24Q6TFL4 600 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 DPPA3Q6W0C5 159 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 SGPP2Q8IWX5 399 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 ZNF709Q8N972 641 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 FAM3CQ92520 227 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 ALG14Q96F25 216 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 PLK3Q9H4B4 646 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 C5orf66Q9H5L9 145 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 FBXO34Q9NWN3 711 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 BET1LQ9NYM9 111 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 COLQQ9Y215 455 aaPredicted RBP6.45□□□□□ -1.38
CPNE4-208ENST00000511604 KLHDC2Q9Y2U9 406 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 ALPK2Q86TB3 2170 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 HEATR5BQ9P2D3 2071 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.45□□□□□ -1.38
CPNE4-208ENST00000511604 A0A1W2PRS3 328 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 MAP1LC3B2A6NCE7 125 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 WIPF3A6NGB9 483 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 METTL12A8MUP2 240 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 C1QTNF3-AMACRE9PGA6 284 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 SPINT1O43278 529 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 HIST1H1CP16403 213 aaKnown RBP6.45□□□□□ -1.38
CPNE4-208ENST00000511604 ZNF16P17020 682 aaPredicted RBP6.45□□□□□ -1.38
CPNE4-208ENST00000511604 CD52P31358 61 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 CDKN1AP38936 164 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 KHKP50053 298 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 ZNF92Q03936 586 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 POM121L1PQ3SYA9 428 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 DUSP28Q4G0W2 176 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 TCEAL5Q5H9L2 206 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 CDCP2Q5VXM1 449 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 FAM90A2PQ658T7 463 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 MFSD12Q6NUT3 480 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 PLXDC2Q6UX71 529 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 Q6ZVL8 140 aa6.45□□□□□ -1.38
CPNE4-208ENST00000511604 TRAPPC6BQ86SZ2 158 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms