RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ZNF721Q8TF20 911 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 PLEKHA2Q9HB19 425 aa13.16□□□□□ -0.3
USP38-202ENST00000510377 PNLIPRP3Q17RR3 467 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 RBMS3Q6XE24 437 aaKnown RBP13.15□□□□□ -0.3
USP38-202ENST00000510377 HOGA1Q86XE5 327 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 CMTM1Q8IZ96 169 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 OR1J1Q8NGS3 322 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 SNIP1Q8TAD8 396 aaKnown RBP13.15□□□□□ -0.3
USP38-202ENST00000510377 SAT2Q96F10 170 aaPredicted RBP13.15□□□□□ -0.3
USP38-202ENST00000510377 UTP23Q9BRU9 249 aaKnown RBP13.15□□□□□ -0.3
USP38-202ENST00000510377 G6PC2Q9NQR9 355 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.3
USP38-202ENST00000510377 TRBV23-1A0A0A0MS06 115 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 C1orf100Q5SVJ3 147 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 TMEM164Q5U3C3 297 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 LCN15Q6UWW0 184 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 SLC16A14Q7RTX9 510 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 SKA3Q8IX90 412 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 FBXL14Q8N1E6 418 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 RHBDD1Q8TEB9 315 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 SCARF2Q96GP6 870 aaPredicted RBP13.15□□□□□ -0.3
USP38-202ENST00000510377 GNG13Q9P2W3 67 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 FAM24AA6NFZ4 105 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 PPP1R2P9O14990 202 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 EIF3GO75821 320 aaKnown RBP eCLIP13.15□□□□□ -0.3
USP38-202ENST00000510377 MT-ND4LP03901 98 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 CD74P04233 296 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 PNLIPP16233 465 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 FSTP19883 344 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 FHITP49789 147 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 AKR7LQ8NHP1 331 aa13.15□□□□□ -0.3
USP38-202ENST00000510377 IGHV3-64DA0A0J9YX35 117 aa13.15□□□□□ -0.31
USP38-202ENST00000510377 IGHV4-34P06331 123 aa13.15□□□□□ -0.31
USP38-202ENST00000510377 RTL6Q6ICC9 239 aa13.15□□□□□ -0.31
USP38-202ENST00000510377 C17orf78Q8N4C9 275 aa13.15□□□□□ -0.31
USP38-202ENST00000510377 SLC25A31Q9H0C2 315 aa13.15□□□□□ -0.31
USP38-202ENST00000510377 GPR132Q9UNW8 380 aa13.15□□□□□ -0.31
USP38-202ENST00000510377 FIGNL2A6NMB9 653 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 C5orf67F2Z3F1 127 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 BCAT2O15382 392 aaPredicted RBP13.14□□□□□ -0.31
USP38-202ENST00000510377 CALCRP30988 508 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 OTX2P32243 289 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 ECH1Q13011 328 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 TEX30Q5JUR7 227 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
USP38-202ENST00000510377 OCSTAMPQ9BR26 566 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 PECRQ9BY49 303 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 GHRLQ9UBU3 117 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 SERPINE3A8MV23 424 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 CD27P26842 260 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 ZNF133P52736 654 aaPredicted RBP13.14□□□□□ -0.31
USP38-202ENST00000510377 DCDP81605 110 aaKnown RBP13.14□□□□□ -0.31
USP38-202ENST00000510377 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 ZNF519Q8TB69 540 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 PIGQQ9BRB3 760 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 DNAJB11Q9UBS4 358 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 SLCO1B1Q9Y6L6 691 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 PHF3Q92576 2039 aaKnown RBP13.14□□□□□ -0.31
USP38-202ENST00000510377 HLA-HP01893 362 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 ZNF735P0CB33 412 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 RBP2P50120 134 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 P2RY4P51582 365 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 ZNF266Q14584 549 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 EIF4E3Q8N5X7 224 aaKnown RBP13.14□□□□□ -0.31
USP38-202ENST00000510377 OXGR1Q96P68 337 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 ST3GAL6Q9Y274 331 aa13.14□□□□□ -0.31
USP38-202ENST00000510377 CD79AP11912 226 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 DHRS11Q6UWP2 260 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 BIVMQ86UB2 503 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 SLC26A1Q9H2B4 701 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 GFOD1Q9NXC2 390 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 H0YIZ8 118 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 CYB5BO43169 146 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 LY86O95711 162 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 CCR5P51681 352 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 ZNF813Q6ZN06 617 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 AAED1Q7RTV5 226 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 YRDCQ86U90 279 aaKnown RBP13.13□□□□□ -0.31
USP38-202ENST00000510377 MVB12AQ96EY5 273 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 GNRHR2Q96P88 292 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 ALKBH3Q96Q83 286 aaPredicted RBP13.13□□□□□ -0.31
USP38-202ENST00000510377 PRDM6Q9NQX0 595 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 RCC2Q9P258 522 aaKnown RBP13.13□□□□□ -0.31
USP38-202ENST00000510377 A0A0U1RQK1 487 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 HPNP05981 417 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 ZNF239Q16600 458 aaKnown RBP13.13□□□□□ -0.31
USP38-202ENST00000510377 RNF212Q495C1 297 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 MRPL21Q7Z2W9 205 aaKnown RBP13.13□□□□□ -0.31
USP38-202ENST00000510377 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 BCO1Q9HAY6 547 aa13.13□□□□□ -0.31
USP38-202ENST00000510377 ZNF107Q9UII5 783 aaPredicted RBP13.13□□□□□ -0.31
USP38-202ENST00000510377 NSG1A0A0A6YYJ2 146 aa13.12□□□□□ -0.31
USP38-202ENST00000510377 A0A1B0GTI1 187 aa13.12□□□□□ -0.31
USP38-202ENST00000510377 LILRA5A6NI73 299 aa13.12□□□□□ -0.31
USP38-202ENST00000510377 MS4A18H0YCH9 400 aa13.12□□□□□ -0.31
USP38-202ENST00000510377 B4GALT1P15291 398 aa13.12□□□□□ -0.31
USP38-202ENST00000510377 GSK3AP49840 483 aa13.12□□□□□ -0.31
USP38-202ENST00000510377 FOXK1P85037 733 aa13.12□□□□□ -0.31
USP38-202ENST00000510377 TESK1Q15569 626 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms