RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CIB2O75838 187 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 OR7A10O76100 309 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RGS11O94810 467 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 CNIH1O95406 144 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 CH25HO95992 272 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 MT-ND1P03886 318 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 FABP3P05413 133 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 H1F0P07305 194 aaKnown RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ACAA1P09110 424 aaPredicted RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 FAM90A15PP0C7V4 464 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 FAM90A13PP0C7W8 464 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 FAM90A14PP0C7W9 464 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 FAM90A24PP0C7X0 464 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 IFI30P13284 250 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 HSD17B1P14061 328 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 NCK1P16333 377 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 TNFRSF1BP20333 461 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 CA6P23280 308 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 NOS3P29474 1203 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 KDELR2P33947 212 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 GDNFP39905 211 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 GPR4P46093 362 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 OR1E2P47887 323 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RASSF2P50749 326 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 GYS2P54840 703 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 UGT2B15P54855 530 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 NANOS2P60321 138 aaKnown RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RAP1BP61224 184 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RAP1AP62834 184 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 CSNK2BP67870 215 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 SLC35B1P78383 322 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RPL18Q07020 188 aaKnown RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ECH1Q13011 328 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 GPR50Q13585 617 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 KRR1Q13601 381 aaKnown RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 GK2Q14410 553 aaPredicted RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 DUSP7Q16829 419 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ANKDD1AQ495B1 522 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 FAM98BQ52LJ0 330 aaKnown RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ALG10Q5BKT4 473 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 CXorf66Q5JRM2 361 aaPredicted RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 MINOS1Q5TGZ0 78 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RPL13AP3Q6NVV1 102 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 SLC25A47Q6Q0C1 308 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 WDR82Q6UXN9 313 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 Q6ZRM9 215 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 TCF23Q7RTU1 214 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 SPATA12Q7Z6I5 190 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 C5orf24Q7Z6I8 188 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 VTCN1Q7Z7D3 282 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ADCK1Q86TW2 530 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 NRMQ8IXM6 262 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 SLC15A3Q8IY34 581 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ALDH16A1Q8IZ83 802 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 DEFB107AQ8IZN7 70 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 FAM185AQ8N0U4 392 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 DEFB125Q8N687 156 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RNF148Q8N7C7 305 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 POM121L12Q8N7R1 296 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF491Q8N8L2 437 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ZNRF1Q8ND25 227 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 GPR32P1Q8NGA4 272 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 OR4P4Q8NGL7 312 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 PFN4Q8NHR9 129 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 C2CD4CQ8TF44 421 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 LRRC29Q8WV35 223 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 FRZBQ92765 325 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ITFG2Q969R8 447 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 KCTD12Q96CX2 325 aaKnown RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RASD2Q96D21 266 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 WDR89Q96FK6 387 aaPredicted RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RSRC1Q96IZ7 334 aaKnown RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF570Q96NI8 536 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RAB3IPQ96QF0 476 aaPredicted RBP2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ALG12Q9BV10 488 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 TEX12Q9BXU0 123 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 DNTTIP1Q9H147 329 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 YY1AP1Q9H869 796 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 RNPEPL1Q9HAU8 725 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 INIPQ9NRY2 104 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 TBC1D23Q9NUY8 699 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 CMTM6Q9NX76 183 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ING3Q9NXR8 418 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ACTR3BQ9P1U1 418 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF391Q9UJN7 358 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF222Q9UK12 451 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 MOB4Q9Y3A3 225 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 TIMM10BQ9Y5J6 103 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 HSPE1-MOB4S4R3N1 261 aa2.49□□□□□ -2.01
TCOF1-208ENST00000506063 IGKV1D-17A0A075B6S4 117 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 IGHV4OR15-8A0A075B7B6 117 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 TRAV27A0A087WT01 109 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 A0A087WW49 117 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 A0A1W2PPL8 197 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 A0A1W2PRQ8 180 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 NPIPB13A6NJU9 1138 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 NPIPB4C9JG80 1138 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 GNGT2O14610 69 aa2.48□□□□□ -2.01
TCOF1-208ENST00000506063 GYG2O15488 501 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms