RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 FOXRED2Q8IWF2 684 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 KDM8Q8N371 416 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 CCDC197Q8NCU1 140 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 OR8G5Q8NG78 346 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 OR4S1Q8NGB4 309 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 OR8J3Q8NGG0 315 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 SLC25A40Q8TBP6 338 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 ADAMTS16Q8TE57 1224 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 LZICQ8WZA0 190 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 NABP1Q96AH0 204 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 SPDL1Q96EA4 605 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 RCHY1Q96PM5 261 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 OR52B2Q96RD2 323 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 MCHR1Q99705 422 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 COQ7Q99807 217 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 HCAR1Q9BXC0 346 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 OR2J1Q9GZK6 312 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 PAIP1Q9H074 479 aaKnown RBP3.16□□□□□ -1.9
USP54-217ENST00000498213 NSRP1Q9H0G5 558 aaKnown RBP3.16□□□□□ -1.9
USP54-217ENST00000498213 SP140LQ9H930 580 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 RNPEPL1Q9HAU8 725 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 ACOXLQ9NUZ1 547 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 MRPL15Q9P015 296 aaKnown RBP3.16□□□□□ -1.9
USP54-217ENST00000498213 MYEF2Q9P2K5 600 aaKnown RBP3.16□□□□□ -1.9
USP54-217ENST00000498213 GIMAP2Q9UG22 337 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 CD300AQ9UGN4 299 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 ZNF391Q9UJN7 358 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 AURKCQ9UQB9 309 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 GAB2Q9UQC2 676 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 TMEM5Q9Y2B1 443 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 ARL2BPQ9Y2Y0 163 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 MED31Q9Y3C7 131 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 ADAM18Q9Y3Q7 739 aa3.16□□□□□ -1.9
USP54-217ENST00000498213 hCG_1809904A0A1W2PP81 198 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 A0A1W2PPE2 198 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 A0A1W2PR64 198 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 A0A1W2PRV1 198 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 ZSCAN5BA6NJL1 495 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 BBIP1A8MTZ0 92 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 USP17L23D6RBM5 183 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 TRAPPC2LH3BP13 241 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 XKRYO14609 159 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 IMPA2O14732 288 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SLC22A2O15244 555 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SGCEO43556 437 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 IDH3BO43837 385 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 TRMUO75648 421 aaKnown RBP3.15□□□□□ -1.91
USP54-217ENST00000498213 OR7A10O76100 309 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CLPTM1O96005 669 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 APOC1P02654 83 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 MELTFP08582 738 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SBK2P0C263 348 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 UMPSP11172 480 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 ZNF32P17041 273 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 FUT1P19526 365 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 EEF1B2P24534 225 aaKnown RBP3.15□□□□□ -1.91
USP54-217ENST00000498213 IL12AP29459 219 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CD80P33681 288 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CD200P41217 278 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 KIR2DS4P43632 304 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 IER3P46695 156 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 GLIPR1P48060 266 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CRIP2P52943 208 aaPredicted RBP3.15□□□□□ -1.91
USP54-217ENST00000498213 RAD23AP54725 363 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 ERVK-25P63136 954 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 GLO1Q04760 184 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 RPL18Q07020 188 aaKnown RBP3.15□□□□□ -1.91
USP54-217ENST00000498213 BNIP1Q12981 228 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 PSG7Q13046 419 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CYLC2Q14093 348 aaPredicted RBP3.15□□□□□ -1.91
USP54-217ENST00000498213 HERPUD1Q15011 391 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 ZMYND11Q15326 602 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SLC36A3Q495N2 470 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CDONQ4KMG0 1287 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 FGD3Q5JSP0 725 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 PHYHD1Q5SRE7 291 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 LCN1P1Q5VSP4 162 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CARD17Q5XLA6 110 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 WDR25Q64LD2 544 aaPredicted RBP3.15□□□□□ -1.91
USP54-217ENST00000498213 SLC25A47Q6Q0C1 308 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 EPGNQ6UW88 154 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 TMPRSS11FQ6ZWK6 438 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SLC36A1Q7Z2H8 476 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 TRPM8Q7Z2W7 1104 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 LRP11Q86VZ4 500 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 ZNF101Q8IZC7 436 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CLEC4FQ8N1N0 589 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 CYB561A3Q8NBI2 242 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 PAPD5Q8NDF8 572 aaKnown RBP3.15□□□□□ -1.91
USP54-217ENST00000498213 CSNK2A3Q8NEV1 391 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SDR9C7Q8NEX9 313 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SLC24A4Q8NFF2 622 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 OR2AK2Q8NG84 335 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 OR4F17Q8NGA8 305 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 OR10S1Q8NGN2 331 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 C8orf46Q8TAG6 207 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SLC26A7Q8TE54 656 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 TMEM239Q8WW34 195 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 ORAI1Q96D31 301 aa3.15□□□□□ -1.91
USP54-217ENST00000498213 SGTBQ96EQ0 304 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms