RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 OR6K2Q8NGY2 324 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR5W2Q8NH69 310 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 RDH11Q8TC12 318 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF418Q8TF45 676 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 APOBEC3DQ96AK3 386 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 UHRF2Q96PU4 802 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 LYSMD1Q96S90 227 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SMIM3Q9BZL3 60 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SELENOIQ9C0D9 397 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 VN1R1Q9GZP7 353 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM126AQ9H061 195 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 NOX3Q9HBY0 568 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR5AC2Q9NZP5 309 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF222Q9UK12 451 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 FZD1Q9UP38 647 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TIMM10BQ9Y5J6 103 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 CASKIN1Q8WXD9 1431 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ABCA8O94911 1581 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 RGPD1P0DJD0 1748 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 CACNA1IQ9P0X4 2223 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 NEXMIFQ5QGS0 1516 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 CROCCQ5TZA2 2017 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 CAMTA1Q9Y6Y1 1673 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 KIF20BQ96Q89 1820 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 DENND4BO75064 1496 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 CFTRP13569 1480 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 DEPDC5O75140 1603 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 GXYLT2A0PJZ3 443 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM159BA6NKW6 160 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 LINC00473A8K010 186 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 PRSS46E5RG02 174 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 J3QR06 171 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 K7ERI5 159 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 HBZP02008 142 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SP9P0CG40 484 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 EGR2P11161 476 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 PSG1P11464 419 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 HSD17B1P14061 328 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF17P17021 662 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF19P17023 458 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 USF1P22415 310 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 FASP25445 335 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SHC1P29353 583 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 MIPP30301 263 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 GRPRP30550 384 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 DCTP40126 519 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TNFRSF4P43489 277 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 KIR2DS4P43632 304 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 NUMBP49757 651 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF133P52736 654 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 NXPH1P58417 271 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 RAE1P78406 368 aaKnown RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 CRYZQ08257 329 aaKnown RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR2F1Q13607 317 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 FZD2Q14332 565 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF266Q14584 549 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM132DQ14C87 1099 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 P2RY6Q15077 328 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR8B8Q15620 311 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 HMGN3Q15651 99 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SNRNP35Q16560 246 aaKnown RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 GGTA1PQ4G0N0 100 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ALG10BQ5I7T1 473 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 DCST2Q5T1A1 773 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM162BQ5T6X4 162 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ANKRD16Q6P6B7 361 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ARL9Q6T311 187 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 DND1Q8IYX4 353 aaKnown RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 FTMTQ8N4E7 242 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 GBGT1Q8N5D6 347 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF611Q8N823 705 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 FER1L6-AS1Q8NA97 138 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR1J2Q8NGS2 313 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR5B3Q8NH48 314 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 VN1R17PQ8TDU5 208 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR8D1Q8WZ84 308 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 MOB3AQ96BX8 217 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 IMP4Q96G21 291 aaKnown RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR6C1Q96RD1 312 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TRIB3Q96RU7 358 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 RASL10BQ96S79 203 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 MBOAT4Q96T53 435 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 MGLLQ99685 303 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 DOHHQ9BU89 302 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TAPBPLQ9BX59 468 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM45AQ9NWC5 275 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 GPATCH2LQ9NWQ4 482 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ARMCX1Q9P291 453 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 DKK2Q9UBU2 259 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 RALYQ9UKM9 306 aaKnown RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC7A7Q9UM01 511 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 LAMTOR2Q9Y2Q5 125 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 DCCP43146 1447 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 AHDC1Q5TGY3 1603 aaPredicted RBP2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 TRAV38-1A0A0B4J264 116 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 EXOC1LA0A1B0GW35 172 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 WDR27A2RRH5 827 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 INMT-MINDY4F8WBC2 141 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 TIMP1P01033 207 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms