RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 GAGE2EQ4V326 116 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 FOXB2Q5VYV0 432 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 TMEM252Q8N6L7 170 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 HSD17B14Q9BPX1 270 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 JPT2Q9H910 190 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 GAGE2DQ9UEU5 116 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 TAC3Q9UHF0 121 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 DUSP13Q9UII6 198 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 MBD1Q9UIS9 605 aaPredicted RBP5.28□□□□□ -1.56
USF3-204ENST00000496826 TINAGQ9UJW2 476 aa5.28□□□□□ -1.56
USF3-204ENST00000496826 MYH3P11055 1940 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 TRAV30A0A087WSZ9 112 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 CLEC18AA5D8T8 446 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 FZD9O00144 591 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 GEMIN2O14893 280 aaKnown RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 PSCAO43653 123 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 CD8AP01732 235 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 GYPAP02724 150 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 DEFB115Q30KQ5 88 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 KHDC1Q4VXA5 237 aaKnown RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 ZNF322Q6U7Q0 402 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 CCBE1Q6UXH8 406 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 CLEC18CQ8NCF0 446 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 KREMEN2Q8NCW0 462 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 FUBP1Q96AE4 644 aaKnown RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 TWSG1Q9GZX9 223 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SLC25A18Q9H1K4 315 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 TMED3Q9Y3Q3 217 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 MYH7BA7E2Y1 1941 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 MEX3AA1L020 520 aaKnown RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 PLPP1O14494 284 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 CCL16O15467 120 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 TMEM50AO95807 157 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 LHBP01229 141 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 TDGF1P13385 188 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 GLULP15104 373 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 HLA-GP17693 338 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 IFITM3Q01628 133 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SLC10A6Q3KNW5 377 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SLC35E3Q7Z769 313 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 PHF13Q86YI8 300 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 SPICQ8N5J4 248 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 TMEM45BQ96B21 275 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 C17orf77Q96MU5 243 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 HDHD3Q9BSH5 251 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 Q9Y3F1 56 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 ABCA1O95477 2261 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 ATP10BO94823 1461 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 ABCC10Q5T3U5 1492 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 DOPEY2Q9Y3R5 2298 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 A0A0A6YYD4 124 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 TRAV41A0A0B4J266 112 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 HSPB6O14558 160 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 PRKNO60260 465 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 WNT3P56703 355 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 CEACAM7Q14002 265 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 PNLIPRP3Q17RR3 467 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SPNS3Q6ZMD2 512 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 NR2C2APQ86WQ0 139 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 MUC20Q8N307 709 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 OR4P4Q8NGL7 312 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 NRSN2Q9GZP1 204 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SIRT3Q9NTG7 399 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 PTGDR2Q9Y5Y4 395 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 PZPP20742 1482 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 ERVK-7P63135 1459 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 H3BTX0 84 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SRD5A1P18405 259 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 ELAVL3Q14576 367 aaKnown RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 TCTEX1D4Q5JR98 221 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 FKBP1CQ5VVH2 108 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 ABHD14AQ9BUJ0 271 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 PRDM14Q9GZV8 571 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 GDF2Q9UK05 429 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 SLC27A5Q9Y2P5 690 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 TMEM56-RWDD3S4R434 201 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 KIF1BO60333 1816 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SNURFLB1AK76 121 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 H3BML4 177 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SDCBPO00560 298 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 CYB561P49447 251 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 DUSP5Q16690 384 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 OR4D11Q8NGI4 311 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SCGB3A1Q96QR1 104 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 C1QTNF2Q9BXJ5 285 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 MRPL16Q9NX20 251 aaKnown RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 HSPB7Q9UBY9 170 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 VDAC3Q9Y277 283 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 PRG4Q92954 1404 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 GJB5O95377 273 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
USF3-204ENST00000496826 SLC35B2Q8TB61 432 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 INPP5KQ9BT40 448 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 APOOQ9BUR5 198 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 SELENOIQ9C0D9 397 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 GREM2Q9H772 168 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 IL36GQ9NZH8 169 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 ADAMTS5Q9UNA0 930 aa5.27□□□□□ -1.57
USF3-204ENST00000496826 A0A1B0GW15 77 aa5.26□□□□□ -1.57
USF3-204ENST00000496826 GLTPD2A6NH11 291 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms