RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 OTOSQ8NHW6 89 aa11.48□□□□□ -0.57
VARS-228ENST00000495010 TEX47Q8TBZ9 253 aa11.48□□□□□ -0.57
VARS-228ENST00000495010 DPF1Q92782 380 aa11.48□□□□□ -0.57
VARS-228ENST00000495010 MUC13Q9H3R2 512 aa11.48□□□□□ -0.57
VARS-228ENST00000495010 NIPAL2Q9H841 368 aa11.48□□□□□ -0.57
VARS-228ENST00000495010 CMC2Q9NRP2 79 aa11.48□□□□□ -0.57
VARS-228ENST00000495010 OR14J1Q9UGF5 321 aa11.48□□□□□ -0.57
VARS-228ENST00000495010 SYNGR1O43759 233 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 NXPH2O95156 264 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 HSD17B1P14061 328 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 PRDX6P30041 224 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 CEBPDP49716 269 aaPredicted RBP11.47□□□□□ -0.57
VARS-228ENST00000495010 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
VARS-228ENST00000495010 CD83Q01151 205 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 SLC34A1Q06495 639 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 RIPPLY1Q0D2K3 151 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 DMRTC1Q5HYR2 192 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 ZNF770Q6IQ21 691 aaPredicted RBP11.47□□□□□ -0.57
VARS-228ENST00000495010 CCDC121Q6ZUS5 278 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 KRT77Q7Z794 578 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 CAPSLQ8WWF8 208 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 ZNF488Q96MN9 340 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 HILPDAQ9Y5L2 63 aa11.47□□□□□ -0.57
VARS-228ENST00000495010 TSSC4Q9Y5U2 329 aaPredicted RBP11.47□□□□□ -0.57
VARS-228ENST00000495010 WI2-2373I1.2A0A1W2PRP0 233 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 C17orf98A8MV24 154 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 H3BN98 237 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 SELENOFO60613 162 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 TK1P04183 234 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 ATP6V1B1P15313 513 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 AZGP1P25311 298 aaKnown RBP11.46□□□□□ -0.57
VARS-228ENST00000495010 HAAOP46952 286 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 DYNLT3P51808 116 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 CBX1P83916 185 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 PPP1R8Q12972 351 aaKnown RBP11.46□□□□□ -0.57
VARS-228ENST00000495010 KHDC1LQ5JSQ8 128 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 ZNF684Q5T5D7 378 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 ZNF626Q68DY1 528 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 LCN8Q6JVE9 175 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 Q6ZS46 218 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 PIGWQ7Z7B1 504 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 ZNF573Q86YE8 665 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 NDNFQ8TB73 568 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 ITFG2Q969R8 447 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 GPR61Q9BZJ8 451 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.46□□□□□ -0.57
VARS-228ENST00000495010 ENPP5Q9UJA9 477 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 PIGLQ9Y2B2 252 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 POLDIP2Q9Y2S7 368 aa11.46□□□□□ -0.57
VARS-228ENST00000495010 A0A0U1RQV5 110 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 ODF3BA8MYP8 253 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 PRR23D1E9PI22 279 aaPredicted RBP11.45□□□□□ -0.58
VARS-228ENST00000495010 ZNF728P0DKX0 622 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 PRR23D2P0DMB1 279 aaPredicted RBP11.45□□□□□ -0.58
VARS-228ENST00000495010 EDDM3BP56851 147 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 KRTAP10-11P60412 298 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 MICAQ29983 383 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 ASCC1Q8N9N2 400 aaKnown RBP11.45□□□□□ -0.58
VARS-228ENST00000495010 OR11H6Q8NGC7 330 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 OR4X2Q8NGF9 303 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 AKR1E2Q96JD6 320 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 CDRT15Q96T59 188 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 DGCR6LQ9BY27 220 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 CCDC134Q9H6E4 229 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 REEP1Q9H902 201 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 LAMP5Q9UJQ1 280 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 U3KQV3 271 aa11.45□□□□□ -0.58
VARS-228ENST00000495010 TMEM269A0A1B0GVZ9 245 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 ACOD1A6NK06 481 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 J3QT63 122 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 SASH3O75995 380 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 NRASP01111 189 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 RBP4P02753 201 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 PGA5P0DJD9 388 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 IGHV1-8P0DP01 117 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 DLX6P56179 175 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 RPS7P62081 194 aaKnown RBP11.44□□□□□ -0.58
VARS-228ENST00000495010 DCTN2Q13561 401 aaKnown RBP11.44□□□□□ -0.58
VARS-228ENST00000495010 PLBD1Q6P4A8 553 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 KCTD18Q6PI47 426 aaPredicted RBP11.44□□□□□ -0.58
VARS-228ENST00000495010 GDPD3Q7L5L3 318 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 KRT74Q7RTS7 529 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 BATF2Q8N1L9 274 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 IQCF1Q8N6M8 205 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 MYDGFQ969H8 173 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 OR8B4Q96RC9 309 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 B9D2Q9BPU9 175 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 TAS2R1Q9NYW7 299 aa11.44□□□□□ -0.58
VARS-228ENST00000495010 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.44□□□□□ -0.58
VARS-228ENST00000495010 SAMHD1Q9Y3Z3 626 aaKnown RBP11.44□□□□□ -0.58
VARS-228ENST00000495010 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
VARS-228ENST00000495010 HOXD3P31249 432 aaPredicted RBP11.43□□□□□ -0.58
VARS-228ENST00000495010 ESRRGP62508 458 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 ACTA2P62736 377 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 ACTG2P63267 376 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 ACTC1P68032 377 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 ACTA1P68133 377 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 IL18R1Q13478 541 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 MINOS1Q5TGZ0 78 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms