RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ZNF727A8MUV8 499 aa16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 SEC14L6B5MCN3 397 aa16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 FTCDNL1E5RQL4 147 aa16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 GRINAQ7Z429 371 aa16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 ABHD12BQ7Z5M8 362 aaPredicted RBP16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 LRRC18Q8N456 261 aa16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 HSD17B11Q8NBQ5 300 aa16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 MFSD8Q8NHS3 518 aa16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 MED29Q9NX70 200 aa16.99■□□□□ 0.31
SNAPC3-206ENST00000490969 A0A1W2PQD3 144 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 CRYM-AS1A6NIL9 109 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 GPR137BO60478 399 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 HPNP05981 417 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 SERPINA2P20848 420 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 DAP3P51398 398 aaKnown RBP16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 HSD11B2P80365 405 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 SPNS3Q6ZMD2 512 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 FAM89BQ8N5H3 189 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 FAM213BQ8TBF2 198 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 NTNG2Q96CW9 530 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 ATXN7L1Q9ULK2 861 aaPredicted RBP16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 K7ESF4 209 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 BCAT2O15382 392 aaPredicted RBP16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 CTSDP07339 412 aaPredicted RBP16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 CD27P26842 260 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 APOBEC1P41238 236 aaKnown RBP16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 PLXDC2Q6UX71 529 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 SPEM1Q8N4L4 309 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 GPR119Q8TDV5 335 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 ZNF2Q9BSG1 426 aaPredicted RBP16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 TMED3Q9Y3Q3 217 aa16.98■□□□□ 0.31
SNAPC3-206ENST00000490969 ZNF878C9JN71 531 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 CXCL1P09341 107 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 CD38P28907 300 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 POU3F1Q03052 451 aaPredicted RBP16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 ZNF343Q6P1L6 599 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 Q8WTZ3 238 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 CLDN23Q96B33 292 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 SHDQ96IW2 340 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 MEGF10Q96KG7 1140 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 SMDT1Q9H4I9 107 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 BCO1Q9HAY6 547 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 CXorf65A6NEN9 183 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 XRCC2O43543 280 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BKO60814 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BJP06899 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 SLC2A1P11166 492 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BOP23527 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 BLVRBP30043 206 aaPredicted RBP16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BBP33778 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 ECI1P42126 302 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BDP58876 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BCP62807 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 ELOBQ15370 118 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST2H2BEQ16778 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIKESHIQ53FT3 197 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 GPR157Q5UAW9 335 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 TMEM182Q6ZP80 229 aaPredicted RBP16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 REC114Q7Z4M0 266 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BHQ93079 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 RAB39BQ96DA2 213 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 JSRP1Q96MG2 331 aaPredicted RBP16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BNQ99877 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 HIST1H2BMQ99879 126 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 PECRQ9BY49 303 aa16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 ZNF701Q9NV72 531 aaPredicted RBP16.97■□□□□ 0.31
SNAPC3-206ENST00000490969 NCOR1O75376 2440 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 IGKV1D-8A0A087WSZ0 117 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 KIR2DS5A0A0G2JLQ3 304 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 A0A0G2JNG1 304 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 FOXI3A8MTJ6 420 aaPredicted RBP16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 H3BQ15 152 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 K7N7A8 449 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 KIR2DS3K7RE56 304 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 F10P00742 488 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 KIR2DS5Q14953 304 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 TCTN2Q96GX1 697 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 FAM71F1Q96KD3 344 aaPredicted RBP16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 NELFAQ9H3P2 528 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 GPR84Q9NQS5 396 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 THADAQ6YHU6 1953 aa16.96■□□□□ 0.31
SNAPC3-206ENST00000490969 H0YIG0 161 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 TSPAN2O60636 221 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 DIRAS3O95661 229 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 IGKV3-11P04433 115 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 CD63P08962 238 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 TAGLN2P37802 199 aaKnown RBP16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 HHEXQ03014 270 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 RSU1Q15404 277 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 APCDD1LQ8NCL9 501 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 C5orf34Q96MH7 638 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 TGM7Q96PF1 710 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 GPR61Q9BZJ8 451 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 MOB1AQ9H8S9 216 aa16.96■□□□□ 0.3
SNAPC3-206ENST00000490969 PPP1R2P9O14990 202 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 ZNF17P17021 662 aa16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 AFF3P51826 1226 aaKnown RBP16.95■□□□□ 0.3
SNAPC3-206ENST00000490969 HSF1Q00613 529 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms