RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SHHQ15465 462 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 UBE2SQ16763 222 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC36A2Q495M3 483 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SDHAF4Q5VUM1 108 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OLFML2AQ68BL7 652 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 LEMD1Q68G75 181 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR2T5Q6IEZ7 315 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 XKRXQ6PP77 449 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF620Q6ZNG0 422 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 RTL4Q6ZR62 310 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 RFLNAQ6ZTI6 216 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 MBOAT2Q6ZWT7 520 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF571Q7Z3V5 609 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM150AQ86TG1 271 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 DAW1Q8N136 415 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 CA13Q8N1Q1 262 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 GAPTQ8N292 157 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 GPR26Q8NDV2 337 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR10W1Q8NGF6 305 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 OR2T29Q8NH02 315 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 DYNC2LI1Q8TCX1 351 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 CLDN23Q96B33 292 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 RPUSD4Q96CM3 377 aaKnown RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 FAM19A4Q96LR4 140 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 PRAP1Q96NZ9 151 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 LGMNQ99538 433 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 SELENOSQ9BQE4 189 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 UGT2B28Q9BY64 529 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 RPF2Q9H7B2 306 aaKnown RBP2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 FGF22Q9HCT0 170 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM100Q9NV29 134 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 EXD2Q9NVH0 621 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 FKBP14Q9NWM8 211 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 PAK5Q9P286 719 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 CES1P1Q9UKY3 287 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ACOT9Q9Y305 439 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ALPK3Q96L96 1907 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 UNC80Q8N2C7 3258 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 VCANP13611 3396 aa2.42□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF236Q9UL36 1845 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 CENPBD1B2RD01 187 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 C21orf140B9A014 251 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 C9J4A7 227 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM238C9JI98 176 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 BIRC5O15392 142 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 PHF1O43189 567 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 CTNSO60931 367 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 RPP14O95059 124 aaKnown RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 KLF8O95600 359 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 RAB36O95755 333 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 THRAP10827 490 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 VDAC2P45880 294 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 TAS2R60P59551 318 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 RANP62826 216 aaKnown RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 CD164Q04900 197 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 C2orf54Q08AI8 447 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 TSPAN31Q12999 210 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 MED21Q13503 144 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 NAB1Q13506 487 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 SNCBQ16143 134 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 LRRC26Q2I0M4 334 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 C9orf66Q5T8R8 295 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 SYPL2Q5VXT5 272 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 NPSR1Q6W5P4 371 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 SSX7Q7RTT5 188 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 RAB43Q86YS6 212 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 NRMQ8IXM6 262 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 LSMEM2Q8N112 164 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC22A18ASQ8N1D0 253 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 Q8N402 240 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 NUP37Q8NFH4 326 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 OR5L1Q8NGL2 311 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 DTD1Q8TEA8 209 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 FAM222BQ8WU58 562 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 IFT81Q8WYA0 676 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF689Q96CS4 500 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 LINC00479Q96M42 142 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 OPRPNQ99935 248 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 PYGO2Q9BRQ0 406 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 OCR1Q9BZK8 76 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 UPF3AQ9H1J1 476 aaKnown RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 ARV1Q9H2C2 271 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 PRO3102Q9H379 93 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 METTL8Q9H825 291 aaKnown RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 ABCB10Q9NRK6 738 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 KCNIP1Q9NZI2 227 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 DHRS4-AS1Q9P1J3 65 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 CLCF1Q9UBD9 225 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 BTNL2Q9UIR0 455 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 CLEC4EQ9ULY5 219 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF257Q9Y2Q1 563 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 PRG3Q9Y2Y8 225 aaPredicted RBP2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 LRRC37A2A6NM11 1700 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 MYH6P13533 1939 aa2.41□□□□□ -2.02
DEPDC1-204ENST00000489862 IGHV4-30-2A0A087WSY4 118 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 FAM240AA0A1B0GVK7 77 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 TINCRA0A1B0GVN0 87 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 ISPDA4D126 451 aa2.4□□□□□ -2.03
DEPDC1-204ENST00000489862 H7C417 338 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms