RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 GNB3P16520 340 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 GIFP27352 417 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 MPV17P39210 176 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 RAD52P43351 418 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 GPM6AP51674 278 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 NAAAQ02083 359 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 FAM27E3Q08E93 113 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 PPA1Q15181 289 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 AGAP6Q5VW22 663 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 UNQ6126/PRO20091Q6UXV3 157 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 SAXO1Q8IYX7 474 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 CHST4Q8NCG5 386 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 OR51T1Q8NGJ9 327 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 KLF14Q8TD94 323 aaPredicted RBP8.08□□□□□ -1.12
SF3B1-211ENST00000487698 ARHGAP5-AS1Q96IT6 56 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 CACNG6Q9BXT2 260 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 BCL2L14Q9BZR8 327 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 ELL3Q9HB65 397 aaPredicted RBP8.08□□□□□ -1.12
SF3B1-211ENST00000487698 MEMO1Q9Y316 297 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 PLCE1Q9P212 2302 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 ACACBO00763 2458 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 OR5B21A6NL26 309 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF732B4DXR9 585 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 AKR7A2O43488 359 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 HTR3BO95264 441 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 TCRBP04435 133 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 SFTPBP07988 381 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 SFTPCP11686 197 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 GTF2F2P13984 249 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 SELEP16581 610 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 CA6P23280 308 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 CCR6P51684 374 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 PSG7Q13046 419 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 PNLIPRP3Q17RR3 467 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 ALKBH6Q3KRA9 238 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 C22orf34Q6ZV56 151 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 SLC25A26Q70HW3 274 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 FJX1Q86VR8 437 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 TMEM200AQ86VY9 491 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 C1orf174Q8IYL3 243 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 OR4C16Q8NGL9 310 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 OR51F2Q8NH61 342 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 NUDCD2Q8WVJ2 157 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 ST8SIA4Q92187 359 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 PPP1R14BQ96C90 147 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 MUCL1Q96DR8 90 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 MRPS24Q96EL2 167 aaKnown RBP8.08□□□□□ -1.12
SF3B1-211ENST00000487698 CYYR1Q96J86 154 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 ANAPC10Q9UM13 185 aa8.08□□□□□ -1.12
SF3B1-211ENST00000487698 NBASA2RRP1 2371 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 CSTBP04080 98 aaKnown RBP8.07□□□□□ -1.12
SF3B1-211ENST00000487698 CD74P04233 296 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 KITLGP21583 273 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 RCVRNP35243 200 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 CA7P43166 264 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 HAAOP46952 286 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 ZNF83P51522 516 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 BTG1P62324 171 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 DAZAP2Q15038 168 aaPredicted RBP8.07□□□□□ -1.12
SF3B1-211ENST00000487698 RSBN1Q5VWQ0 802 aaPredicted RBP8.07□□□□□ -1.12
SF3B1-211ENST00000487698 MBNL2Q5VZF2 373 aaKnown RBP8.07□□□□□ -1.12
SF3B1-211ENST00000487698 SIGIRRQ6IA17 410 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 ELP2Q6IA86 826 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 TMEM211Q6ICI0 200 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 FAAP20Q6NZ36 180 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 PCSK4Q6UW60 755 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 TRAPPC6BQ86SZ2 158 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 TMEM229BQ8NBD8 167 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 RND1Q92730 232 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 HIST1H2AAQ96QV6 131 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 USB1Q9BQ65 265 aaKnown RBP8.07□□□□□ -1.12
SF3B1-211ENST00000487698 NUDT15Q9NV35 164 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 NUBP2Q9Y5Y2 271 aa8.07□□□□□ -1.12
SF3B1-211ENST00000487698 INMT-MINDY4F8WBC2 141 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 CA11O75493 328 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 CD3DP04234 171 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 AKAIN1P0CW23 69 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 MPZP25189 248 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 BLVRBP30043 206 aaPredicted RBP8.06□□□□□ -1.12
SF3B1-211ENST00000487698 FAUP35544 74 aaKnown RBP8.06□□□□□ -1.12
SF3B1-211ENST00000487698 RBM11P57052 281 aaKnown RBP8.06□□□□□ -1.12
SF3B1-211ENST00000487698 TAS2R19P59542 299 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 GNG3P63215 75 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 TATDN3Q17R31 274 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 FAM76BQ5HYJ3 339 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 BTN2A1Q7KYR7 527 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 WDR86Q86TI4 376 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 OSR2Q8N2R0 312 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 OR4D10Q8NGI6 311 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 POM121Q96HA1 1249 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 PECRQ9BY49 303 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 OR10A4Q9H209 315 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 PURGQ9UJV8 347 aaKnown RBP8.06□□□□□ -1.12
SF3B1-211ENST00000487698 HSF4Q9ULV5 492 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 NOP16Q9Y3C1 178 aaKnown RBP8.06□□□□□ -1.12
SF3B1-211ENST00000487698 NBEAQ8NFP9 2946 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 TRGV8A0A0C4DH27 118 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 A0A1B0GWJ7 208 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 SERPINE3A8MV23 424 aa8.06□□□□□ -1.12
SF3B1-211ENST00000487698 C16orf97H3BN30 126 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms