RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 PDCD6O75340 191 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 LY86O95711 162 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 ONECUT2O95948 504 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 CALCRP30988 508 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 MLF1P58340 268 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 SPATA46Q5T0L3 261 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 RGS7BPQ6MZT1 257 aaPredicted RBP13.1□□□□□ -0.31
EPHB4-206ENST00000487222 CLEC9AQ6UXN8 241 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 MRGPREQ86SM8 312 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 FAAP24Q9BTP7 215 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 MIXL1Q9H2W2 232 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 NAA60Q9H7X0 242 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 GNB4Q9HAV0 340 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 TMEM9BQ9NQ34 198 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 WNT16Q9UBV4 365 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 IGHV1OR21-1A0A087WYE8 117 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 SEC14L6B5MCN3 397 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 TNFSF15O95150 251 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 HPP00738 406 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 SEMG1P04279 462 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 GGNBP1Q5YKI7 109 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 C6orf201Q7Z4U5 140 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 OR4D11Q8NGI4 311 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 SLC35B3Q9H1N7 401 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 ARRDC1-AS1Q9H2J1 176 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 CLCF1Q9UBD9 225 aa13.1□□□□□ -0.31
EPHB4-206ENST00000487222 RPL11P62913 178 aaKnown RBP13.09□□□□□ -0.31
EPHB4-206ENST00000487222 IL13RA2Q14627 380 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 GNRHR2Q96P88 292 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 TMPRSS5Q9H3S3 457 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 NINQ8N4C6 2090 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 CLDN34H7C241 214 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 PPP1CBP62140 327 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 KISS1RQ969F8 398 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-206ENST00000487222 NDFIP1Q9BT67 221 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 TRGV10A0A0A0MS01 117 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 CNN1P51911 297 aaKnown RBP13.09□□□□□ -0.31
EPHB4-206ENST00000487222 SUMO1P63165 101 aaKnown RBP13.09□□□□□ -0.31
EPHB4-206ENST00000487222 TRA2AQ13595 282 aaKnown RBP eCLIP13.09□□□□□ -0.31
EPHB4-206ENST00000487222 IL11RAQ14626 422 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 ZNF770Q6IQ21 691 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-206ENST00000487222 ANKRD37Q7Z713 158 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 POM121L2Q96KW2 1035 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 GPR137Q96N19 417 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 NARFLQ9H6Q4 476 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 ERRFI1Q9UJM3 462 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-206ENST00000487222 ADAM20O43506 726 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 COX7A2P2O60397 106 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 FBP1P09467 338 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 ZNF32P17041 273 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 OR3A4PP47883 348 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 PRDX4Q13162 271 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 DGAT2L6Q6ZPD8 337 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 OR5C1Q8NGR4 320 aa13.09□□□□□ -0.31
EPHB4-206ENST00000487222 H3BMH7 237 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 SDHBP21912 280 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 MOGAT2Q3SYC2 334 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 WFDC8Q8IUA0 241 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 C20orf196Q8IYI0 205 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 OR2C3Q8N628 320 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 KLHDC1Q8N7A1 406 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 LSMEM1Q8N8F7 131 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 OR11G2Q8NGC1 345 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 ZNF426Q9BUY5 554 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 NXF2Q9GZY0 626 aaKnown RBP13.08□□□□□ -0.31
EPHB4-206ENST00000487222 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 NEU3Q9UQ49 428 aa13.08□□□□□ -0.31
EPHB4-206ENST00000487222 MCM3APO60318 1980 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 SELENOPP49908 381 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 ZNF774Q6NX45 483 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 TAAR9Q96RI9 348 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 IFT22Q9H7X7 185 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 UCK1Q9HA47 277 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 NGFP01138 241 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 POU2F2P09086 479 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 PDCD1Q15116 288 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 C10orf111Q8N326 155 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 GABRG3Q99928 467 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 FLRT3Q9NZU0 649 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 HEXAP06865 529 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
EPHB4-206ENST00000487222 SURF2Q15527 256 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-206ENST00000487222 C9orf152Q5JTZ5 239 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 OR2A2Q6IF42 318 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 TRILQ7L0X0 811 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 ADAT1Q9BUB4 502 aaKnown RBP13.08□□□□□ -0.32
EPHB4-206ENST00000487222 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-206ENST00000487222 TAAR3PQ9P1P4 343 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 FBXL17Q9UF56 701 aa13.08□□□□□ -0.32
EPHB4-206ENST00000487222 INHBBP09529 407 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 TPPP2P59282 170 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 RNPS1Q15287 305 aaKnown RBP13.07□□□□□ -0.32
EPHB4-206ENST00000487222 ISXQ2M1V0 245 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 TMEM92Q6UXU6 159 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 ZNF835Q9Y2P0 537 aa13.07□□□□□ -0.32
EPHB4-206ENST00000487222 M0R1X1 148 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms