RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 TMEM30CPA0ZSE6 113 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 CBY3A6NI87 242 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 ASCL1P50553 236 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 NOVA1P51513 510 aaKnown RBP14.65□□□□□ -0.06
COL7A1-210ENST00000487017 MOGAT2Q3SYC2 334 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 HSD17B13Q7Z5P4 300 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-210ENST00000487017 HES7Q9BYE0 225 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF835Q9Y2P0 537 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 ZBTB25P24278 435 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 SPATA46Q5T0L3 261 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 GGNBP1Q5YKI7 109 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 TRMT61AQ96FX7 289 aaKnown RBP14.65□□□□□ -0.06
COL7A1-210ENST00000487017 CTDSP1Q9GZU7 261 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 NAA60Q9H7X0 242 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 SHISA7A6NL88 538 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 ADAM20O43506 726 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 FAHD2BQ6P2I3 314 aaPredicted RBP14.65□□□□□ -0.06
COL7A1-210ENST00000487017 Q8IYB0 196 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 C20orf196Q8IYI0 205 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 C9orf62Q8N4C0 152 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 FAHD2AQ96GK7 314 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 EDEM2Q9BV94 578 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 FLRT3Q9NZU0 649 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 TUBGCP6Q96RT7 1819 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 LEUTXA8MZ59 168 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 GNG3P63215 75 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 PDCD1Q15116 288 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 CYC1P08574 325 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 OR5I1Q13606 314 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 WIPI1Q5MNZ9 446 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-210ENST00000487017 FAM162BQ5T6X4 162 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 TMPRSS13Q9BYE2 586 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 RASL12Q9NYN1 266 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 C3orf85A0A1B0GTC6 90 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 PLA2G10O15496 165 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 SPP1P10451 314 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 MOB1BQ7L9L4 216 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 GVQW1Q8N7I0 195 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 MBD1Q9UIS9 605 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-210ENST00000487017 WSB1Q9Y6I7 421 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 MASP2O00187 686 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 MPZL1O95297 269 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 TMEM267Q0VDI3 215 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-210ENST00000487017 C9orf50Q5SZB4 431 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 C11orf42Q8N5U0 333 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 TRIP11Q15643 1979 aa14.64□□□□□ -0.07
COL7A1-210ENST00000487017 NTN1O95631 604 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF17P17021 662 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 CXCL3P19876 107 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 NPEPL1Q8NDH3 523 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 CADM4Q8NFZ8 388 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 KCNK15Q9H427 330 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 FRRS1LQ9P0K9 344 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 MPGP29372 298 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 IL13RA2Q14627 380 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 MESTQ5EB52 335 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 RAB40CQ96S21 281 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 CHRDL1Q9BU40 450 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF426Q9BUY5 554 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 SLC35B3Q9H1N7 401 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 H3BMH7 237 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF79Q15937 498 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 JMJD6Q6NYC1 403 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF707Q96C28 371 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-210ENST00000487017 NRTNQ99748 197 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 FAM96BQ9Y3D0 163 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 PPP1CBP62140 327 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 SUMO1P63165 101 aaKnown RBP14.63□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF774Q6NX45 483 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 OR4D9Q8NGE8 314 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 OR5C1Q8NGR4 320 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 PTP4A1Q93096 173 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 HYAL1Q12794 435 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 LSMEM1Q8N8F7 131 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 ZNF784Q8NCA9 323 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-210ENST00000487017 UCK1Q9HA47 277 aa14.63□□□□□ -0.07
COL7A1-210ENST00000487017 IGHV1OR21-1A0A087WYE8 117 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 COL9A1P20849 921 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 DEFB109BQ30KR1 87 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 ASB10Q8WXI3 467 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 GNRHR2Q96P88 292 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 SLC2A8Q9NY64 477 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 DBX1A6NMT0 343 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 INHBBP09529 407 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 ATG4DQ86TL0 474 aaPredicted RBP14.62□□□□□ -0.07
COL7A1-210ENST00000487017 OR11H7Q8NGC8 314 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 LINC00052Q96N35 136 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 NDFIP1Q9BT67 221 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 NXF2Q9GZY0 626 aaKnown RBP14.62□□□□□ -0.07
COL7A1-210ENST00000487017 FBXL17Q9UF56 701 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 HLA-BQ31612 363 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 TMEM230Q96A57 120 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 ADAT1Q9BUB4 502 aaKnown RBP14.62□□□□□ -0.07
COL7A1-210ENST00000487017 UQCC1Q9NVA1 299 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 PHOX2AO14813 284 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 KRASP01116 189 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 PPP1CAP62136 330 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 RGS7BPQ6MZT1 257 aaPredicted RBP14.62□□□□□ -0.07
COL7A1-210ENST00000487017 SEZ6L2Q6UXD5 910 aa14.62□□□□□ -0.07
COL7A1-210ENST00000487017 SLC24A4Q8NFF2 622 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms