RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 MARCOQ9UEW3 520 aaPredicted RBP3.4□□□□□ -1.87
LSM2-211ENST00000475835 NAT8BQ9UHF3 227 aa3.4□□□□□ -1.87
LSM2-211ENST00000475835 SHPKQ9UHJ6 478 aa3.4□□□□□ -1.87
LSM2-211ENST00000475835 KIF26AQ9ULI4 1882 aaPredicted RBP3.4□□□□□ -1.87
LSM2-211ENST00000475835 MMP17Q9ULZ9 603 aa3.4□□□□□ -1.87
LSM2-211ENST00000475835 RCE1Q9Y256 329 aa3.4□□□□□ -1.87
LSM2-211ENST00000475835 YBX2Q9Y2T7 364 aaKnown RBP3.4□□□□□ -1.87
LSM2-211ENST00000475835 WNT6Q9Y6F9 365 aa3.4□□□□□ -1.87
LSM2-211ENST00000475835 V9GYY9 64 aa3.4□□□□□ -1.87
LSM2-211ENST00000475835 LCTP09848 1927 aa3.4□□□□□ -1.87
LSM2-211ENST00000475835 ZNF236Q9UL36 1845 aa3.4□□□□□ -1.87
LSM2-211ENST00000475835 TMEM131Q92545 1883 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 A0A087WUU8 490 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 TRBV4-1A0A0J9YWV2 114 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 CENPVL1A0A0U1RR11 272 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 A0A1B0GU03 582 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 A0A1W2PRU2 124 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 TCRBV9S1A1TA0A576 114 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 TCRBV5S2A0A599 114 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 PRSS37A4D1T9 235 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 MAP1LC3B2A6NCE7 125 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 ZNF840PA6NDX5 716 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 TMEM235A6NFC5 223 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 FRG2CA6NGY1 282 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 SERINC4A6NH21 518 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 SHISA7A6NL88 538 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 B4DEV8 164 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 FAM157AC9JC47 383 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 ZNF593O00488 134 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 GABRPO00591 440 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 HSD17B6O14756 317 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 NBR2O15453 112 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 ZNF207O43670 478 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 TRAF3IP2O43734 574 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 TMPRSS11DO60235 418 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 HSBP1O75506 76 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 CNMDO75829 334 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 CER1O95813 267 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 VTNP04004 478 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 MAS1P04201 325 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 HLA-DQB2P05538 268 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 CTSDP07339 412 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 CA3P07451 260 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 FGF3P11487 239 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 ADH5P11766 374 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 PIPP12273 146 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 TPT1P13693 172 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 CTSEP14091 401 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 COX7A2P14406 83 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 SNRPBP14678 240 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 HIST1H1DP16402 221 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 ZNF17P17021 662 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 NPY1RP25929 384 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 BTCP35070 178 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 CRYBB2P43320 205 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 KIR2DL2P43627 348 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 SLC6A9P48067 706 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 PTH2RP49190 550 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 HNRNPA3P51991 378 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 TCL1AP56279 114 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 PCBP4P57723 403 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 TAS2R31P59538 309 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 RHOAP61586 193 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 UFM1P61960 85 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 LCN6P62502 163 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 RPL8P62917 257 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 SNRPNP63162 240 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 PITX1P78337 314 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 ZXDAP98168 799 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 SP4Q02446 784 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 TMEM267Q0VDI3 215 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 RBM39Q14498 530 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 ZNF266Q14584 549 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 MAD2L1BPQ15013 274 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 PMVKQ15126 192 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 PDGFRLQ15198 375 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 OR8B8Q15620 311 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 BATFQ16520 125 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 MRPL23Q16540 153 aaKnown RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 HIST3H3Q16695 136 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 ST3GAL2Q16842 350 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 CCSMST1Q4G0I0 132 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 CXorf66Q5JRM2 361 aaPredicted RBP3.39□□□□□ -1.87
LSM2-211ENST00000475835 SPANXN3Q5MJ09 141 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 ZNF626Q68DY1 528 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 TMEM211Q6ICI0 200 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 KCNIP4Q6PIL6 250 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 OPN5Q6U736 354 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 FAM180AQ6UWF9 173 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 FAM159AQ6UWV7 190 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 TMEM184AQ6ZMB5 413 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 IL17RELQ6ZVW7 336 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 MOB1BQ7L9L4 216 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 MAVSQ7Z434 540 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 TMPRSS11BQ86T26 416 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 AMIGO3Q86WK7 504 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 CALHM3Q86XJ0 350 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 GKN2Q86XP6 184 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 WFDC8Q8IUA0 241 aa3.39□□□□□ -1.87
LSM2-211ENST00000475835 FBXO16Q8IX29 292 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms