RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 PSMB2P49721 201 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 TAS2R60P59551 318 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 ADIGQ0VDE8 80 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 TSC22D1Q15714 1073 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 TMEM69Q5SWH9 247 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 THOC7Q6I9Y2 204 aaKnown RBP1.67□□□□□ -2.14
LTN1-204ENST00000475344 SMARCD3Q6STE5 483 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 USP50Q70EL3 339 aaPredicted RBP1.67□□□□□ -2.14
LTN1-204ENST00000475344 VTCN1Q7Z7D3 282 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 SGPP2Q8IWX5 399 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 OR2M7Q8NG81 312 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 ORAOV1Q8WV07 137 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 OR8D1Q8WZ84 308 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 Q96MT0 163 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 TSNAXQ99598 290 aaKnown RBP1.67□□□□□ -2.14
LTN1-204ENST00000475344 KIR3DX1Q9H7L2 352 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 C6orf50Q9HD87 102 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 AQRO60306 1485 aaKnown RBP eCLIP1.67□□□□□ -2.14
LTN1-204ENST00000475344 NEURL4Q96JN8 1562 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 SORL1Q92673 2214 aa1.67□□□□□ -2.14
LTN1-204ENST00000475344 MROH5Q6ZUA9 1318 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 KIAA1671Q9BY89 1806 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 IGKV1-6A0A0C4DH72 117 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 OR5AL1P0C617 328 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 OR4Q2P0C623 313 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 HLA-GP17693 338 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 SRMP19623 302 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 CFHR2P36980 270 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 HCCSP53701 268 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 OR12D2P58182 307 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 GRB2P62993 217 aaKnown RBP1.66□□□□□ -2.14
LTN1-204ENST00000475344 PAFAH1B2P68402 229 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 ATP5G2Q06055 141 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 TOMM34Q15785 309 aaPredicted RBP1.66□□□□□ -2.14
LTN1-204ENST00000475344 CDNFQ49AH0 187 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 DEFB134Q4QY38 66 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 HSP90AA4PQ58FG1 418 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 ZNF678Q5SXM1 525 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 CPTPQ5TA50 214 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 TRMT10CQ7L0Y3 403 aaKnown RBP1.66□□□□□ -2.14
LTN1-204ENST00000475344 DAZ4Q86SG3 579 aaKnown RBP1.66□□□□□ -2.14
LTN1-204ENST00000475344 ZNF420Q8TAQ5 688 aaPredicted RBP1.66□□□□□ -2.14
LTN1-204ENST00000475344 ZNF707Q96C28 371 aaPredicted RBP1.66□□□□□ -2.14
LTN1-204ENST00000475344 STACQ99469 402 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 ZNF649Q9BS31 505 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 WDR55Q9H6Y2 383 aaPredicted RBP1.66□□□□□ -2.14
LTN1-204ENST00000475344 RDH14Q9HBH5 336 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 CRLF2Q9HC73 371 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 LZTFL1Q9NQ48 299 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 DAZ1Q9NQZ3 744 aaKnown RBP1.66□□□□□ -2.14
LTN1-204ENST00000475344 INIPQ9NRY2 104 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 TFR2Q9UP52 801 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 SLC7A11Q9UPY5 501 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 PPIL1Q9Y3C6 166 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 KLF12Q9Y4X4 402 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 SLC22A7Q9Y694 548 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 TMEM131Q92545 1883 aa1.66□□□□□ -2.14
LTN1-204ENST00000475344 LOC102724200A0A096LPH7 203 aaPredicted RBP1.65□□□□□ -2.15
LTN1-204ENST00000475344 C9JQL5 133 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 CLDN34H7C241 214 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 H7C2Y5 167 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 J3QT63 122 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 IGKV1-39P01597 117 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 IGKV1D-39P04432 117 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 INAFM2P0DMQ5 153 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 HOXB8P17481 243 aaPredicted RBP1.65□□□□□ -2.15
LTN1-204ENST00000475344 HTR2BP41595 481 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 RGS6P49758 472 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 SLC35B1P78383 322 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 LINC00303Q3SY05 128 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 LRRC8AQ8IWT6 810 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 FBXO36Q8NEA4 188 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 OR8A1Q8NGG7 326 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 BAALCQ8WXS3 180 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 ING5Q8WYH8 240 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 ANP32EQ9BTT0 268 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 MS4A8Q9BY19 250 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 TSGA10Q9BZW7 698 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 OR2AG1Q9H205 316 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 TRIM45Q9H8W5 580 aaPredicted RBP1.65□□□□□ -2.15
LTN1-204ENST00000475344 ZNF302Q9NR11 478 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 CA10Q9NS85 328 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 IFNKQ9P0W0 207 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 ENPP4Q9Y6X5 453 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 ZBED9Q6R2W3 1325 aa1.65□□□□□ -2.15
LTN1-204ENST00000475344 RPRD2Q5VT52 1461 aaKnown RBP1.64□□□□□ -2.15
LTN1-204ENST00000475344 A0A0J9YYE9 177 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 GMNCA6NCL1 334 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 IZUMO1RA6ND01 250 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 C4orf51C9J302 202 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 UPK1AO00322 258 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 TRAPPC6AO75865 159 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 KCNK2O95069 426 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 PLEKHA8P1O95397 391 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 ETHE1O95571 254 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 TRBC1P01850 177 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 NUDT2P50583 147 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 BCAP31P51572 246 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 LAMTOR4Q0VGL1 99 aa1.64□□□□□ -2.15
LTN1-204ENST00000475344 WDR43Q15061 677 aaKnown RBP eCLIP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms