RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 NUDT2P50583 147 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 HCCSP53701 268 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 LGALS4P56470 323 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 SMIM11AP58511 58 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 RASSF6Q6ZTQ3 369 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 THAP5Q7Z6K1 395 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 ERI1Q8IV48 349 aaKnown RBP7.45□□□□□ -1.22
VCL-204ENST00000472585 BATF2Q8N1L9 274 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 OR8B12Q8NGG6 310 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 PGAM5Q96HS1 289 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 OR8B4Q96RC9 309 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 IL1RAPQ9NPH3 570 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 ABCB10Q9NRK6 738 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 MRGBPQ9NV56 204 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 ARMC1Q9NVT9 282 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 VNN3Q9NY84 501 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 PITPNC1Q9UKF7 332 aa7.45□□□□□ -1.22
VCL-204ENST00000472585 TSSC4Q9Y5U2 329 aaPredicted RBP7.45□□□□□ -1.22
VCL-204ENST00000472585 SACSQ9NZJ4 4579 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 SH2D7A6NKC9 451 aaPredicted RBP7.44□□□□□ -1.22
VCL-204ENST00000472585 FAM90A22PA8MWA6 464 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 PRR32B1ATL7 298 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 SELENOFO60613 162 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 SOX14O95416 240 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 AMY1AP04745 511 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 AMY2AP04746 511 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 ARG1P05089 322 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 CCDC159P0C7I6 412 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 PIPP12273 146 aaPredicted RBP7.44□□□□□ -1.22
VCL-204ENST00000472585 CFL1P23528 166 aaKnown RBP7.44□□□□□ -1.22
VCL-204ENST00000472585 CD24P25063 80 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 GSTT1P30711 240 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 CAPZA1P52907 286 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 DGCR2P98153 550 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 CEACAM21Q3KPI0 293 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 KHDC1LQ5JSQ8 128 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 ZNF626Q68DY1 528 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 HAGHLQ6PII5 290 aaPredicted RBP7.44□□□□□ -1.22
VCL-204ENST00000472585 ETV3LQ6ZN32 361 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 TCF23Q7RTU1 214 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 CENPVQ7Z7K6 275 aaPredicted RBP7.44□□□□□ -1.22
VCL-204ENST00000472585 ZDHHC23Q8IYP9 409 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 IQCF1Q8N6M8 205 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 OR11H6Q8NGC7 330 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 OR6N2Q8NGY6 317 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 MYDGFQ969H8 173 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 MALSU1Q96EH3 234 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 INTS14Q96SY0 518 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 ASCL2Q99929 193 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 MCRIP2Q9BUT9 160 aaKnown RBP7.44□□□□□ -1.22
VCL-204ENST00000472585 RGCCQ9H4X1 137 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 LRP12Q9Y561 859 aa7.44□□□□□ -1.22
VCL-204ENST00000472585 F8VVB4 439 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 F8VWA3 439 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 H3BUI4 141 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 MMP23AO75900 390 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 TK1P04183 234 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 FABP3P05413 133 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 H2BFMP0C1H6 154 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 IFNGR2P38484 337 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 DYNLT3P51808 116 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 GNG3P63215 75 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 NKAPLQ5M9Q1 402 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 BAIAP2L2Q6UXY1 529 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 C18orf65Q6ZTR6 163 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 TRPM8Q7Z2W7 1104 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 PIGWQ7Z7B1 504 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 LINC00482Q8N8I6 264 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 POC1AQ8NBT0 407 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 OR4X2Q8NGF9 303 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 OR52L1Q8NGH7 329 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 OR5A2Q8NGI9 324 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 OTOSQ8NHW6 89 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 RPS4Y2Q8TD47 263 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 MYLK2Q9H1R3 596 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 TBC1D23Q9NUY8 699 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 USE1Q9NZ43 259 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 HILPDAQ9Y5L2 63 aa7.43□□□□□ -1.22
VCL-204ENST00000472585 HUWE1Q7Z6Z7 4374 aaKnown RBP7.42□□□□□ -1.22
VCL-204ENST00000472585 PSMD9O00233 223 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 TNFRSF11BO00300 401 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 ARPC2O15144 300 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 NOS1APO75052 506 aaPredicted RBP7.42□□□□□ -1.22
VCL-204ENST00000472585 IGLV3-1P01715 115 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 IGHA1P01876 353 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 PGA5P0DJD9 388 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 HSD17B1P14061 328 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 ERVK11-1P61568 191 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 LCN8Q6JVE9 175 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 RPL13AP3Q6NVV1 102 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 KCTD18Q6PI47 426 aaPredicted RBP7.42□□□□□ -1.22
VCL-204ENST00000472585 C8orf86Q6ZUL3 223 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 MOB3CQ70IA8 216 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 CPLX4Q7Z7G2 160 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 CALHM1Q8IU99 346 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 MRPL41Q8IXM3 137 aaKnown RBP7.42□□□□□ -1.22
VCL-204ENST00000472585 ZNF561Q8N587 486 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 AQP11Q8NBQ7 271 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 OR51D1Q8NGF3 324 aa7.42□□□□□ -1.22
VCL-204ENST00000472585 ZNF671Q8TAW3 534 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms