RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 RFPL4BQ6ZWI9 263 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 CPNE4Q96A23 557 aaPredicted RBP13.04□□□□□ -0.32
UBXN11-213ENST00000472155 FAM173AQ9BQD7 235 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 TM2D1Q9BX74 207 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 PLEKHJ1Q9NW61 149 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 MBD2Q9UBB5 411 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 TNFSF18Q9UNG2 199 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 CSAG2Q9Y5P2 127 aa13.04□□□□□ -0.32
UBXN11-213ENST00000472155 C5orf51A6NDU8 294 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 DBX1A6NMT0 343 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 GEMIN2O14893 280 aaKnown RBP13.03□□□□□ -0.32
UBXN11-213ENST00000472155 MRPL33O75394 65 aaKnown RBP13.03□□□□□ -0.32
UBXN11-213ENST00000472155 DUS4LO95620 317 aaKnown RBP13.03□□□□□ -0.32
UBXN11-213ENST00000472155 OR3A2P47893 321 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 IGFBP7Q16270 282 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 RGS7BPQ6MZT1 257 aaPredicted RBP13.03□□□□□ -0.32
UBXN11-213ENST00000472155 JMJD6Q6NYC1 403 aaPredicted RBP13.03□□□□□ -0.32
UBXN11-213ENST00000472155 LHFPL1Q86WI0 220 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 CALHM1Q8IU99 346 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 PIGCQ92535 297 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 VRK1Q99986 396 aaPredicted RBP13.03□□□□□ -0.32
UBXN11-213ENST00000472155 OSGIN2Q9Y236 505 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 hCG_38984A0A1B0GV85 526 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 SIGLEC5O15389 551 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 B3GALNT1O75752 331 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 KNG1P01042 644 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 NRASP01111 189 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 SERPINA5P05154 406 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 Q6ZPA2 131 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 VASH2Q86V25 355 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 SULT4A1Q9BR01 284 aa13.03□□□□□ -0.32
UBXN11-213ENST00000472155 SVILO95425 2214 aa13.02□□□□□ -0.32
UBXN11-213ENST00000472155 H0YIZ8 118 aa13.02□□□□□ -0.32
UBXN11-213ENST00000472155 TBPP20226 339 aa13.02□□□□□ -0.32
UBXN11-213ENST00000472155 LUMP51884 338 aaPredicted RBP13.02□□□□□ -0.32
UBXN11-213ENST00000472155 SRSF4Q08170 494 aaKnown RBP13.02□□□□□ -0.32
UBXN11-213ENST00000472155 DAZAP2Q15038 168 aaPredicted RBP13.02□□□□□ -0.32
UBXN11-213ENST00000472155 RSU1Q15404 277 aa13.02□□□□□ -0.32
UBXN11-213ENST00000472155 RPUSD3Q6P087 351 aaKnown RBP13.02□□□□□ -0.32
UBXN11-213ENST00000472155 OVCH2Q7RTZ1 564 aa13.02□□□□□ -0.32
UBXN11-213ENST00000472155 CCDC28AQ8IWP9 274 aa13.02□□□□□ -0.32
UBXN11-213ENST00000472155 MARS2Q96GW9 593 aaKnown RBP13.02□□□□□ -0.32
UBXN11-213ENST00000472155 AK3Q9UIJ7 227 aa13.02□□□□□ -0.32
UBXN11-213ENST00000472155 RIF1Q5UIP0 2472 aaKnown RBP13.02□□□□□ -0.33
UBXN11-213ENST00000472155 WISP2O76076 250 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 CPT2P23786 658 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 ZMYND11Q15326 602 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 TMEM128Q5BJH2 165 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 MOB3CQ70IA8 216 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 ARRDC1Q8N5I2 433 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 ZSCAN4Q8NAM6 433 aaPredicted RBP13.02□□□□□ -0.33
UBXN11-213ENST00000472155 OR5AP2Q8NGF4 316 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 OR6K3Q8NGY3 331 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 SCARB1Q8WTV0 552 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 EMG1Q92979 244 aaKnown RBP13.02□□□□□ -0.33
UBXN11-213ENST00000472155 RRNAD1Q96FB5 475 aaKnown RBP13.02□□□□□ -0.33
UBXN11-213ENST00000472155 LINC00052Q96N35 136 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 FGF23Q9GZV9 251 aaPredicted RBP13.02□□□□□ -0.33
UBXN11-213ENST00000472155 GPR160Q9UJ42 338 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 KCNMB2Q9Y691 235 aa13.02□□□□□ -0.33
UBXN11-213ENST00000472155 APOC1P02654 83 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 RPS2P15880 293 aaKnown RBP13.01□□□□□ -0.33
UBXN11-213ENST00000472155 NPBWR2P48146 333 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 RNFT1Q5M7Z0 435 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 RIPPLY2Q5TAB7 128 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 TMEM164Q5U3C3 297 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 TMPRSS7Q7RTY8 843 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 NUFIP2Q7Z417 695 aaKnown RBP13.01□□□□□ -0.33
UBXN11-213ENST00000472155 FBXL14Q8N1E6 418 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 OR1S1Q8NH92 325 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 RBPMSQ93062 196 aaKnown RBP13.01□□□□□ -0.33
UBXN11-213ENST00000472155 BORCS8Q96FH0 119 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 OR10C1Q96KK4 312 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 PPA2Q9H2U2 334 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 SDHAF2Q9NX18 166 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 KMT2EQ8IZD2 1858 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 hCG_1807616A0A1W2PRN6 198 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 ZNF850A8MQ14 1090 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 ZNF708P17019 499 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 HLA-GP17693 338 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 SPEM2Q0P670 501 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 CHRFAM7AQ494W8 412 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 TMEM42Q69YG0 159 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 TMEM65Q6PI78 240 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 UNQ6126/PRO20091Q6UXV3 157 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 PEG10Q86TG7 708 aaKnown RBP13.01□□□□□ -0.33
UBXN11-213ENST00000472155 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 RNF126Q9BV68 326 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 ACKR4Q9NPB9 350 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBXN11-213ENST00000472155 GHRLQ9UBU3 117 aa13.01□□□□□ -0.33
UBXN11-213ENST00000472155 MRPS18CQ9Y3D5 142 aaKnown RBP13.01□□□□□ -0.33
UBXN11-213ENST00000472155 AKAP13Q12802 2813 aa13□□□□□ -0.33
UBXN11-213ENST00000472155 F8VVB4 439 aa13□□□□□ -0.33
UBXN11-213ENST00000472155 F8VWA3 439 aa13□□□□□ -0.33
UBXN11-213ENST00000472155 CRYZL1O95825 349 aa13□□□□□ -0.33
UBXN11-213ENST00000472155 NGFP01138 241 aa13□□□□□ -0.33
UBXN11-213ENST00000472155 CSTBP04080 98 aaKnown RBP13□□□□□ -0.33
UBXN11-213ENST00000472155 C4BPBP20851 252 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms