RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 RPL7P18124 248 aaKnown RBP7.62□□□□□ -1.19
CD47-204ENST00000471694 CNN1P51911 297 aaKnown RBP7.62□□□□□ -1.19
CD47-204ENST00000471694 ROM1Q03395 351 aa7.62□□□□□ -1.19
CD47-204ENST00000471694 MUC15Q8N387 334 aa7.62□□□□□ -1.19
CD47-204ENST00000471694 UCK1Q9HA47 277 aa7.62□□□□□ -1.19
CD47-204ENST00000471694 MSL2Q9HCI7 577 aa7.62□□□□□ -1.19
CD47-204ENST00000471694 V9GYS6 101 aa7.62□□□□□ -1.19
CD47-204ENST00000471694 SHANK3Q9BYB0 1731 aa7.62□□□□□ -1.19
CD47-204ENST00000471694 DUS4LO95620 317 aaKnown RBP7.61□□□□□ -1.19
CD47-204ENST00000471694 HAND1O96004 215 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 KRASP01116 189 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 PPP1CCP36873 323 aaKnown RBP7.61□□□□□ -1.19
CD47-204ENST00000471694 C21orf58P58505 322 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 H3F3AP84243 136 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 DUSP18Q8NEJ0 188 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 OR52N4Q8NGI2 321 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 Q8WTZ3 238 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 A0A1B0GUL6 1792 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 CLEC18AA5D8T8 446 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 HTN3P15516 51 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 ELK1P19419 428 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 CLEC18CQ8NCF0 446 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 RAX2Q96IS3 184 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 ASCL3Q9NQ33 180 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 MIOXQ9UGB7 285 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 GON4LQ3T8J9 2241 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 RER1O15258 196 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 CLDN14O95500 239 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 MGPP08493 103 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 GDNFP39905 211 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 DAPP51397 102 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 P2RX3P56373 397 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 FMODQ06828 376 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 ZNF141Q15928 474 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 TMEM182Q6ZP80 229 aaPredicted RBP7.61□□□□□ -1.19
CD47-204ENST00000471694 C11orf42Q8N5U0 333 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 OR4X2Q8NGF9 303 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 DYNC2LI1Q8TCX1 351 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 PKMYT1Q99640 499 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 WDR61Q9GZS3 305 aaKnown RBP7.61□□□□□ -1.19
CD47-204ENST00000471694 GABARAPL1Q9H0R8 117 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 ORM1P02763 201 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 OR3A1P47881 315 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 SLC6A12P48065 614 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 RPL30P62888 115 aaKnown RBP7.61□□□□□ -1.19
CD47-204ENST00000471694 PRICKLE4Q2TBC4 344 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 C1orf174Q8IYL3 243 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 DDB2Q92466 427 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 VSIG4Q9Y279 399 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 TNRC6CQ9HCJ0 1690 aaKnown RBP7.61□□□□□ -1.19
CD47-204ENST00000471694 RGPD3A6NKT7 1758 aaPredicted RBP7.61□□□□□ -1.19
CD47-204ENST00000471694 A0A0B4J293 547 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 CXorf51AA0A1B0GTR3 108 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 EDIL3O43854 480 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 IGHV4-34P06331 123 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 CDC34P49427 236 aaPredicted RBP7.61□□□□□ -1.19
CD47-204ENST00000471694 BAMBIQ13145 260 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 COL19A1Q14993 1142 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 ZBTB37Q5TC79 503 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 SLC52A3Q9NQ40 469 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 EMCNQ9ULC0 261 aa7.61□□□□□ -1.19
CD47-204ENST00000471694 SS18L1O75177 396 aaPredicted RBP7.6□□□□□ -1.19
CD47-204ENST00000471694 CASP3P42574 277 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 RFX2P48378 723 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 MTNR1BP49286 362 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 RPS27AP62979 156 aaKnown RBP7.6□□□□□ -1.19
CD47-204ENST00000471694 UBA52P62987 128 aaKnown RBP7.6□□□□□ -1.19
CD47-204ENST00000471694 MOB1BQ7L9L4 216 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 TMEM251Q8N6I4 163 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 OR4A4PQ8NGN8 299 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 NIPSNAP1Q9BPW8 284 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 SFXN3Q9BWM7 321 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 CA10Q9NS85 328 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 BMP2P12643 396 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 CALCRP30988 508 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 INPP5JQ15735 1006 aaPredicted RBP7.6□□□□□ -1.19
CD47-204ENST00000471694 COMMD7Q86VX2 200 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 FDCSPQ8NFU4 85 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 VSTM2AQ8TAG5 236 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 SFT2D1Q8WV19 159 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 TMEM74BQ9NUR3 256 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 FBXL2Q9UKC9 423 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 WNT1P04628 370 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 FUT3P21217 361 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 REG1BP48304 166 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 RELBQ01201 579 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 SPACA3Q8IXA5 215 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 OR52M1Q8NGK5 317 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 LSM2Q9Y333 95 aaKnown RBP7.6□□□□□ -1.19
CD47-204ENST00000471694 IGKV3D-15A0A087WSY6 115 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 ZNF705GA8MUZ8 300 aaPredicted RBP7.6□□□□□ -1.19
CD47-204ENST00000471694 FABP7O15540 132 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 SPINT1O43278 529 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 PNPP00491 289 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 IGKV3-15P01624 115 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 KIR2DL2P43627 348 aaPredicted RBP7.6□□□□□ -1.19
CD47-204ENST00000471694 SLC37A1P57057 533 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 C20orf196Q8IYI0 205 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 ABHD14AQ9BUJ0 271 aa7.6□□□□□ -1.19
CD47-204ENST00000471694 WDR13Q9H1Z4 485 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms