RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 TAS2R41P59536 307 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 PPP1CBP62140 327 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 IL5RAQ01344 420 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 RPL18AQ02543 176 aaKnown RBP3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 OR2F1Q13607 317 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 FAM53BQ14153 422 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 CLINT1Q14677 625 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 LTB4RQ15722 352 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF726P1Q15940 193 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 CEACAM21Q3KPI0 293 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC25A35Q3KQZ1 300 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 GPRC6AQ5T6X5 926 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 UBE2UQ5VVX9 321 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 CYB5R2Q6BCY4 276 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 OLIG3Q7RTU3 272 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 SVOPLQ8N434 492 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 SPICQ8N5J4 248 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 OR11H1Q8NG94 326 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 OR10K1Q8NGX5 313 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 OR11H2Q8NH07 326 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 RFESDQ8TAC1 157 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF564Q8TBZ8 553 aaPredicted RBP3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 KCTD4Q8WVF5 259 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 CPNE2Q96FN4 548 aaPredicted RBP3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 UBE2E2Q96LR5 201 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 C20orf144Q9BQM9 153 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 ACTR6Q9GZN1 396 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 ALX4Q9H161 411 aaPredicted RBP3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 MS4A6AQ9H2W1 248 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 LIME1Q9H400 295 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 PRORYQ9H606 182 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 C11orf49Q9H6J7 331 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 TREM2Q9NZC2 230 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC2A6Q9UGQ3 507 aa3.53□□□□□ -1.84
PRPF40A-206ENST00000471167 TEX48A0A1B0GUV7 120 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 FAM240AA0A1B0GVK7 77 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 ANKRD65E5RJM6 399 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 F5H5K5 113 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 TNFRSF11BO00300 401 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 TAAR5O14804 337 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 MGRN1O60291 552 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 UGT2B11O75310 529 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 EIF3GO75821 320 aaKnown RBP eCLIP3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 SLC2A10O95528 541 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 CRYZL1O95825 349 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 HPRT1P00492 218 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 OR9G9P0C7N8 305 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 SCGB1A1P11684 91 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 USF1P22415 310 aaPredicted RBP3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 F2RP25116 425 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 HTR1EP28566 365 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 BTDP43251 543 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 FABP6P51161 128 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 DLX1P56177 255 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 RAB38P57729 211 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 RAB25P57735 213 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 VSX2P58304 361 aaPredicted RBP3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 BTN3A2P78410 334 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 PPP1R1AQ13522 171 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 OR1Q1Q15612 314 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 ECSCRQ19T08 205 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 LRRC75BQ2VPJ9 315 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 ARHGAP11BQ3KRB8 267 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 MUC21Q5SSG8 566 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 FAM71E1Q6IPT2 247 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 WDR74Q6RFH5 385 aaPredicted RBP3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 PAMR1Q6UXH9 720 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 DAW1Q8N136 415 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 LRRC25Q8N386 305 aaPredicted RBP3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 STX19Q8N4C7 294 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 ZNF561Q8N587 486 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 OR4C13Q8NGP0 309 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 STOML3Q8TAV4 291 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 OR51E1Q8TCB6 317 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 Q8WTZ3 238 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 DDIT4LQ96D03 193 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 ZHX1-C8orf76Q96EF9 292 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 PAGE5Q96GU1 130 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 TMEM80Q96HE8 168 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 QKIQ96PU8 341 aaKnown RBP eCLIP3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 TMED9Q9BVK6 235 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 OR51J1Q9H342 316 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 METTL17Q9H7H0 456 aaPredicted RBP3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 ARMC1Q9NVT9 282 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 SLC7A11Q9UPY5 501 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 USP6P35125 1406 aa3.52□□□□□ -1.85
PRPF40A-206ENST00000471167 ARHGEF10O15013 1369 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 CCDC171Q6TFL3 1326 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 LOC100131303A0A0U1RQF7 123 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 OR6C6A6NF89 314 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 CEACAM18A8MTB9 384 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 ZNF878C9JN71 531 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 TCAPO15273 167 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 PLIN3O60664 434 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 CNMDO75829 334 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 CCNKO75909 580 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 HAND1O96004 215 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 APOC1P02654 83 aa3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 KLK3P07288 261 aaPredicted RBP3.51□□□□□ -1.85
PRPF40A-206ENST00000471167 FAM228BP0C875 321 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms