RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 HLA-HP01893 362 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 CSTBP04080 98 aaKnown RBP6.58□□□□□ -1.36
COL6A3-208ENST00000468792 GLAP06280 429 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 CRHP06850 196 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 TMEM225BP0DP42 221 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 WT1P19544 449 aaPredicted RBP6.58□□□□□ -1.36
COL6A3-208ENST00000468792 S100A1P23297 94 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 ZBTB25P24278 435 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 HRH1P35367 487 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 NOVA1P51513 510 aaKnown RBP6.58□□□□□ -1.36
COL6A3-208ENST00000468792 GMFBP60983 142 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 DHRS2Q13268 280 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 RSU1Q15404 277 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 EIF2S3LQ2VIR3 472 aaKnown RBP6.58□□□□□ -1.36
COL6A3-208ENST00000468792 LINC01559Q495D7 138 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 TMEM65Q6PI78 240 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 INO80CQ6PI98 192 aaPredicted RBP6.58□□□□□ -1.36
COL6A3-208ENST00000468792 Q6ZS49 121 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 Q6ZT83 130 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 FAM214BQ7L5A3 538 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 OVCH2Q7RTZ1 564 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 LYG2Q86SG7 212 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 LINC00596Q86U02 117 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 C12orf45Q8N5I9 185 aaPredicted RBP6.58□□□□□ -1.36
COL6A3-208ENST00000468792 GVQW1Q8N7I0 195 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 FAM169BQ8N8A8 192 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 OR4S1Q8NGB4 309 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 OR11H4Q8NGC9 324 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 OR5AP2Q8NGF4 316 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 OR5A2Q8NGI9 324 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 OR6K3Q8NGY3 331 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 MITD1Q8WV92 249 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 GTF3AQ92664 365 aaKnown RBP6.58□□□□□ -1.36
COL6A3-208ENST00000468792 MRGPRFQ96AM1 343 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 DACT3Q96B18 629 aaPredicted RBP6.58□□□□□ -1.36
COL6A3-208ENST00000468792 BANF2Q9H503 90 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 OBP2BQ9NPH6 170 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 PLSCR3Q9NRY6 295 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 DLL3Q9NYJ7 618 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 OPN4Q9UHM6 478 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 GPR132Q9UNW8 380 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 FREM1Q5H8C1 2179 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 MYO7BQ6PIF6 2116 aa6.58□□□□□ -1.36
COL6A3-208ENST00000468792 RIF1Q5UIP0 2472 aaKnown RBP6.57□□□□□ -1.36
COL6A3-208ENST00000468792 C5orf49A4QMS7 147 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 OR5B21A6NL26 309 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 DBX1A6NMT0 343 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 EFSO43281 561 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 RAD51DO75771 328 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 DUS4LO95620 317 aaKnown RBP6.57□□□□□ -1.36
COL6A3-208ENST00000468792 IGHV3-9P01782 118 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 COX5AP20674 150 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 SERPINA2P20848 420 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 FPR2P25090 351 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 CHATP28329 748 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 PTGER4P35408 488 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 APLNRP35414 380 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 FGL1Q08830 312 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 MRPL49Q13405 166 aaKnown RBP6.57□□□□□ -1.36
COL6A3-208ENST00000468792 ARFRP1Q13795 201 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 ZNF169Q14929 603 aaPredicted RBP6.57□□□□□ -1.36
COL6A3-208ENST00000468792 MICBQ29980 383 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 LGALSLQ3ZCW2 172 aaPredicted RBP6.57□□□□□ -1.36
COL6A3-208ENST00000468792 C4orf46Q504U0 113 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 TMEM128Q5BJH2 165 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 SIGIRRQ6IA17 410 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 TMEM211Q6ICI0 200 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 TFAP2EQ6VUC0 442 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 FBXW12Q6X9E4 464 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 Q6ZS92 163 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 MRPL21Q7Z2W9 205 aaKnown RBP6.57□□□□□ -1.36
COL6A3-208ENST00000468792 P4HA3Q7Z4N8 544 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 CD163Q86VB7 1156 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 ZDHHC23Q8IYP9 409 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 OSR2Q8N2R0 312 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 C17orf78Q8N4C9 275 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 ZADH2Q8N4Q0 377 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 OR5M8Q8NGP6 311 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 OR5H2Q8NGV7 314 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 EMG1Q92979 244 aaKnown RBP6.57□□□□□ -1.36
COL6A3-208ENST00000468792 WBP1Q96G27 269 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 LRFN3Q9BTN0 628 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 PLK3Q9H4B4 646 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 HEXA-AS1Q9H8Q6 139 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 BEX1Q9HBH7 125 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 PLSCR4Q9NRQ2 329 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 CA10Q9NS85 328 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 PLEKHJ1Q9NW61 149 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 OSGIN2Q9Y236 505 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 VSIG4Q9Y279 399 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 FAM186AA6NE01 2351 aa6.57□□□□□ -1.36
COL6A3-208ENST00000468792 PRRC2CQ9Y520 2896 aaKnown RBP6.56□□□□□ -1.36
COL6A3-208ENST00000468792 GVINP1Q7Z2Y8 2422 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 A0A096LPE4 126 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 IGKV1-12A0A0C4DH73 117 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 FAM230AA0A1W2PPH8 454 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 A0A1W2PPZ6 126 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 C9orf170A2RU37 121 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 ZNF503-AS2A6NEH8 195 aa6.56□□□□□ -1.36
COL6A3-208ENST00000468792 TUBAL3A6NHL2 446 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms