RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CCKARP32238 428 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 ACTBP60709 375 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 ACTG1P63261 375 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 SSBP1Q04837 148 aaKnown RBP16.25■□□□□ 0.19
SMC4-209ENST00000468653 HRASLSQ9HDD0 168 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 IL36GQ9NZH8 169 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 SPEF1Q9Y4P9 236 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 ZZEF1O43149 2961 aa16.25■□□□□ 0.19
SMC4-209ENST00000468653 MELTFP08582 738 aa16.24■□□□□ 0.19
SMC4-209ENST00000468653 HIST1H1DP16402 221 aaKnown RBP16.24■□□□□ 0.19
SMC4-209ENST00000468653 BLVRBP30043 206 aaPredicted RBP16.24■□□□□ 0.19
SMC4-209ENST00000468653 GCH1P30793 250 aa16.24■□□□□ 0.19
SMC4-209ENST00000468653 GNG3P63215 75 aa16.24■□□□□ 0.19
SMC4-209ENST00000468653 ALKBH6Q3KRA9 238 aa16.24■□□□□ 0.19
SMC4-209ENST00000468653 Q96M66 194 aa16.24■□□□□ 0.19
SMC4-209ENST00000468653 DPAGT1Q9H3H5 408 aa16.24■□□□□ 0.19
SMC4-209ENST00000468653 PURGQ9UJV8 347 aaKnown RBP16.24■□□□□ 0.19
SMC4-209ENST00000468653 NOP16Q9Y3C1 178 aaKnown RBP16.24■□□□□ 0.19
SMC4-209ENST00000468653 ATRXP46100 2492 aa16.24■□□□□ 0.19
SMC4-209ENST00000468653 NAP1L6A6NFF2 107 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 CYB5AP00167 134 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 FCER2P06734 321 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 GSTP1P09211 210 aaKnown RBP16.23■□□□□ 0.19
SMC4-209ENST00000468653 GABRR1P24046 479 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 BTCP35070 178 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 FABP6P51161 128 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 TMEM50BP56557 158 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 TMEM255AQ5JRV8 349 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 PLAC9Q5JTB6 97 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 RSBN1Q5VWQ0 802 aaPredicted RBP16.23■□□□□ 0.19
SMC4-209ENST00000468653 FJX1Q86VR8 437 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 ZNF573Q86YE8 665 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 OSR2Q8N2R0 312 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 ARHGAP5-AS1Q96IT6 56 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 MICU1Q9BPX6 476 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 RTL8AQ9BWD3 113 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 TIMM8AO60220 97 aaPredicted RBP16.23■□□□□ 0.19
SMC4-209ENST00000468653 GIFP27352 417 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 FAUP35544 74 aaKnown RBP16.23■□□□□ 0.19
SMC4-209ENST00000468653 GNG2P59768 71 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 PLA1AQ53H76 456 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 TRAPPC6BQ86SZ2 158 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 MKXQ8IYA7 352 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 SAXO1Q8IYX7 474 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 CADM3Q8N126 398 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 MRPS24Q96EL2 167 aaKnown RBP16.23■□□□□ 0.19
SMC4-209ENST00000468653 CACNG6Q9BXT2 260 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 MCUBQ9NWR8 336 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 FZR1Q9UM11 496 aa16.23■□□□□ 0.19
SMC4-209ENST00000468653 SHANK1Q9Y566 2161 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 SFTPBP07988 381 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 MBNL2Q5VZF2 373 aaKnown RBP16.22■□□□□ 0.19
SMC4-209ENST00000468653 RGS7BPQ6MZT1 257 aaPredicted RBP16.22■□□□□ 0.19
SMC4-209ENST00000468653 C22orf34Q6ZV56 151 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 RTN4RL2Q86UN3 420 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 NUDCD2Q8WVJ2 157 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 DEDD2Q8WXF8 326 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 SLAMF9Q96A28 289 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 ADAT1Q9BUB4 502 aaKnown RBP16.22■□□□□ 0.19
SMC4-209ENST00000468653 OR10A4Q9H209 315 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 TMEM100Q9NV29 134 aa16.22■□□□□ 0.19
SMC4-209ENST00000468653 KITLGP21583 273 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 ARL6IP1Q15041 203 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 OR8G1Q15617 311 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 TAF9Q16594 264 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 PNLIPRP3Q17RR3 467 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 OLFML2AQ68BL7 652 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 HAGHLQ6PII5 290 aaPredicted RBP16.21■□□□□ 0.19
SMC4-209ENST00000468653 PCSK4Q6UW60 755 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 WFDC8Q8IUA0 241 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 FBXL14Q8N1E6 418 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 OR8G5Q8NG78 346 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 COPZ2Q9P299 210 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 HEATR1Q9H583 2144 aaKnown RBP16.21■□□□□ 0.19
SMC4-209ENST00000468653 POLEQ07864 2286 aa16.21■□□□□ 0.19
SMC4-209ENST00000468653 PCNX1Q96RV3 2341 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 FOXI3A8MTJ6 420 aaPredicted RBP16.21■□□□□ 0.18
SMC4-209ENST00000468653 TRAPPC2LH3BP13 241 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 MFNGO00587 321 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 AKAIN1P0CW23 69 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 CCR6P51684 374 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 TAS2R19P59542 299 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 ARFRP1Q13795 201 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 SFRP4Q6FHJ7 346 aaPredicted RBP16.21■□□□□ 0.18
SMC4-209ENST00000468653 SSX8Q7RTT4 187 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 TMEM200AQ86VY9 491 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 UPRTQ96BW1 309 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 RADILQ96JH8 1075 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 PECRQ9BY49 303 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 IFT46Q9NQC8 304 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 ST3GAL6Q9Y274 331 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 KCNK7Q9Y2U2 307 aa16.21■□□□□ 0.18
SMC4-209ENST00000468653 TPRP12270 2363 aaKnown RBP16.2■□□□□ 0.18
SMC4-209ENST00000468653 TCRBP04435 133 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 BCL3P20749 454 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 CD40P25942 277 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 RCVRNP35243 200 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 NPBWR2P48146 333 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 PIGYQ3MUY2 71 aa16.2■□□□□ 0.18
SMC4-209ENST00000468653 NKAPLQ5M9Q1 402 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms