RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 POC1AQ8NBT0 407 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 ASB17Q8WXJ9 295 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 NRBF2Q96F24 287 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 CNN2Q99439 309 aaKnown RBP19.95■□□□□ 0.78
PTCH1-210ENST00000468211 ENPP5Q9UJA9 477 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 TMEM14AQ9Y6G1 99 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 DSCAML1Q8TD84 2053 aa19.95■□□□□ 0.78
PTCH1-210ENST00000468211 A0A1B0GTI1 187 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 A6NIN4 97 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 SLC22A31A6NKX4 558 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 H3BUX3 64 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 ANGPTL7O43827 346 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 NRASP01111 189 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 CAPZA1P52907 286 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 CXCR4P61073 352 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 EFNB1P98172 346 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 BLMHQ13867 455 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 ZNF322Q6U7Q0 402 aaPredicted RBP19.94■□□□□ 0.78
PTCH1-210ENST00000468211 MEPCEQ7L2J0 689 aaKnown RBP19.94■□□□□ 0.78
PTCH1-210ENST00000468211 BATF2Q8N1L9 274 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 OR5R1Q8NH85 324 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 PPP1R35Q8TAP8 253 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 DNAJC9Q8WXX5 260 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 ITFG2Q969R8 447 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 GPR173Q9NS66 373 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 RASL12Q9NYN1 266 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 GTF2A1LQ9UNN4 478 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 SIGLEC9Q9Y336 463 aa19.94■□□□□ 0.78
PTCH1-210ENST00000468211 SF3B6Q9Y3B4 125 aaKnown RBP19.94■□□□□ 0.78
PTCH1-210ENST00000468211 PGA5P0DJD9 388 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 HAAOP46952 286 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 ERVFRD-1P60508 538 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 ZNF684Q5T5D7 378 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 AADACL4Q5VUY2 407 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 TMEM42Q69YG0 159 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 SLC35F2Q8IXU6 374 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 TCEANCQ8N8B7 351 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 OR5D13Q8NGL4 314 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 UBE2FQ969M7 185 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 SSX3Q99909 188 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 ADGRL4Q9HBW9 690 aa19.93■□□□□ 0.78
PTCH1-210ENST00000468211 PQLC2LA1A4F0 135 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 MEGF11A6BM72 1044 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 ANKRD61A6NGH8 418 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 LOC110117498-PIK3R3F6TDL0 507 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 PRDX2P32119 198 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 LY6EQ16553 131 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 SMIM21Q3B7S5 101 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 TMEM200BQ69YZ2 307 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 HIST2H2BDQ6DRA6 164 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 ELMOD2Q8IZ81 293 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 OR4M1Q8NGD0 313 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 OR14K1Q8NGZ2 314 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 MRM2Q9UI43 246 aaKnown RBP19.92■□□□□ 0.78
PTCH1-210ENST00000468211 OR52A1Q9UKL2 312 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 V9GYS6 101 aa19.92■□□□□ 0.78
PTCH1-210ENST00000468211 J3QT63 122 aa19.91■□□□□ 0.78
PTCH1-210ENST00000468211 DNAJC8O75937 253 aaPredicted RBP19.91■□□□□ 0.78
PTCH1-210ENST00000468211 CLVS2Q5SYC1 327 aa19.91■□□□□ 0.78
PTCH1-210ENST00000468211 SLX4IPQ5VYV7 408 aa19.91■□□□□ 0.78
PTCH1-210ENST00000468211 OR5K1Q8NHB7 308 aa19.91■□□□□ 0.78
PTCH1-210ENST00000468211 R4GMQ9 66 aa19.91■□□□□ 0.78
PTCH1-210ENST00000468211 NOS1APO75052 506 aaPredicted RBP19.9■□□□□ 0.78
PTCH1-210ENST00000468211 CCL3L1P16619 93 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 ESRRGP62508 458 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 RPL31P62899 125 aaKnown RBP19.9■□□□□ 0.78
PTCH1-210ENST00000468211 BCL2L15Q5TBC7 163 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 C12orf73Q69YU5 71 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 CRIP3Q6Q6R5 217 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 ASRGL1Q7L266 308 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 SSX6Q7RTT6 188 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 ZNF573Q86YE8 665 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 CALHM1Q8IU99 346 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 ZNF561Q8N587 486 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 OR51G2Q8NGK0 314 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 FAM110DQ8TAY7 271 aaPredicted RBP19.9■□□□□ 0.78
PTCH1-210ENST00000468211 TMEM163Q8TC26 289 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 IL4I1Q96RQ9 567 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 NRIP2Q9BQI9 281 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 CADM1Q9BY67 442 aaKnown RBP19.9■□□□□ 0.78
PTCH1-210ENST00000468211 MEGF9Q9H1U4 602 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 FBLN5Q9UBX5 448 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 SLC22A13Q9Y226 551 aa19.9■□□□□ 0.78
PTCH1-210ENST00000468211 ZAR1LA6NP61 321 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 DLGAP1O14490 977 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 BMXP51813 675 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 ZNF273Q14593 569 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 NXNL2Q5VZ03 156 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 Q6ZSR3 168 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 ANGPTL5Q86XS5 388 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 C1QL4Q86Z23 238 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 MOB1AQ9H8S9 216 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 HES4Q9HCC6 221 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 KRT84Q9NSB2 600 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 CLN6Q9NWW5 311 aa19.89■□□□□ 0.77
PTCH1-210ENST00000468211 SLC1A7O00341 560 aa19.88■□□□□ 0.77
PTCH1-210ENST00000468211 NXPH2O95156 264 aa19.88■□□□□ 0.77
PTCH1-210ENST00000468211 MPZP25189 248 aa19.88■□□□□ 0.77
PTCH1-210ENST00000468211 GABRA5P31644 462 aa19.88■□□□□ 0.77
PTCH1-210ENST00000468211 LRRC75BQ2VPJ9 315 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms